Predicting protein subcellular localization using deep learning
☆16Sep 13, 2019Updated 7 years ago
Alternatives and similar repositories for DeepLoc
Users that are interested in DeepLoc are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆60Jul 5, 2017Updated 9 years ago
- Prediction of mRNA subcellular localization using deep recurrent neural networks☆15Jul 19, 2019Updated 7 years ago
- Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…☆80Sep 6, 2023Updated 3 years ago
- A deep learning-based lncRNA subcellular localization predictor☆16Aug 17, 2022Updated 4 years ago
- An empirical analysis of the efficacy of several state-of-the-art methods on imbalanced Multilabel Classification datasets☆14May 28, 2018Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆63Aug 3, 2024Updated 2 years ago
- Fold Protein Recognition☆10Sep 3, 2020Updated 6 years ago
- A supervised learning model based on Graph Neural Network to predict gene co-expression from chromatin contacts☆12Mar 22, 2023Updated 3 years ago
- Transformer for protein function prediction (version 2)☆14Oct 24, 2026Updated last week
- Cython bindings and Python interface to Jess, a 3D template matching software for protein structures. Now 10x faster!☆12Aug 25, 2026Updated 2 months ago
- Divide and Conquer BLAST: using grid engines to accelerate NCBI-BLAST+ and other sequence analysis tools☆11Apr 26, 2020Updated 6 years ago
- AF2chi implementation code for localColabFold☆10Oct 8, 2026Updated 3 weeks ago
- Python CLI for alignment-free genomics.☆13May 25, 2026Updated 5 months ago
- implement an multi-label algorithm by ranking system through SVM☆13Nov 2, 2018Updated 7 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning"☆10Apr 29, 2021Updated 5 years ago
- Face Forgery Video Detection via Temporal Forgery Cue Unraveling☆14Sep 30, 2026Updated last month
- AlphaJudge is a pipeline that evaluates AlphaFold-predicted protein complexes by combining AI-derived confidence metrics (ipTM, pDockQ, P…☆15Oct 20, 2026Updated last week
- PyTorch implementations of protein secondary structure prediction on CB513.☆17Dec 30, 2018Updated 7 years ago
- Python code to automatically interact with PDBePISA web server☆10Jun 27, 2022Updated 4 years ago
- Source for course materials at http://ged.msu.edu/angus/☆11Jun 4, 2014Updated 12 years ago
- Scripts and documentations on the MCSC decontamination method☆10Jun 13, 2023Updated 3 years ago
- Course materials for the IBioIC Introduction to Bioinformatics training course☆12Jun 4, 2017Updated 9 years ago
- Error correction for Oxford Nanopore data☆47May 29, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Scripts to split reference and run mummer in parallel on an SGE cluster☆11Oct 14, 2016Updated 10 years ago
- Module to determine where repeats are and make soft-masks of said☆10Mar 14, 2024Updated 2 years ago
- Machine learning to predict future number Covid19 Daily Cases (7-day moving average). Long Short Term Memory (LSTM) Predictor and Reinfor…☆14Feb 21, 2021Updated 5 years ago
- ☆17Jul 5, 2020Updated 6 years ago
- 바닥부터 시작하는 R + 바이오인포☆12Nov 28, 2016Updated 9 years ago
- defusion☆14Aug 24, 2021Updated 5 years ago
- Python code to extract features from Protein sequences for Machine Learning/Deep Learning☆21Mar 26, 2022Updated 4 years ago
- pywindow is a Python package for structural analysis of discrete molecules with voids and windows, individually, in molecular systems and…☆13Sep 29, 2025Updated last year
- Code accompanying the publication for compressed graph annotation☆13Feb 14, 2019Updated 7 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆21Aug 30, 2018Updated 8 years ago
- Falcon2Fastg is a tool for converting a FALCON assembly to FASTG format to visualize with Bandage☆13May 16, 2016Updated 10 years ago
- BOINC@TACC project: provides a conduit for routing high-throughput computing jobs from TACC resources to the BOINC server.☆14Jul 23, 2021Updated 5 years ago
- Code to perform homolog detectability analyses as described in Weisman et al. 2020 (https://www.biorxiv.org/content/10.1101/2020.02.27.96…☆18Nov 18, 2024Updated last year
- ESM-driven Pocket Cross Similarity☆18Aug 11, 2025Updated last year
- zzuli Web automatic authentication login☆11Oct 27, 2020Updated 6 years ago
- PyPEF – Pythonic Protein Engineering Framework☆26Sep 6, 2026Updated last month