Predicting protein subcellular localization using deep learning
☆16Sep 13, 2019Updated 6 years ago
Alternatives and similar repositories for DeepLoc
Users that are interested in DeepLoc are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆60Jul 5, 2017Updated 9 years ago
- Prediction of mRNA subcellular localization using deep recurrent neural networks☆15Jul 19, 2019Updated 7 years ago
- Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…☆80Sep 6, 2023Updated 3 years ago
- Implementation of "Accurate classification of protein subcellular localization from high throughput microscopy images using deep learning…☆13Oct 19, 2022Updated 3 years ago
- A deep learning-based lncRNA subcellular localization predictor☆16Aug 17, 2022Updated 4 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- An empirical analysis of the efficacy of several state-of-the-art methods on imbalanced Multilabel Classification datasets☆14May 28, 2018Updated 8 years ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆63Aug 3, 2024Updated 2 years ago
- ☆17Nov 11, 2022Updated 3 years ago
- Python CLI for alignment-free genomics.☆13May 25, 2026Updated 3 months ago
- Fold Protein Recognition☆10Sep 3, 2020Updated 6 years ago
- Divide and Conquer BLAST: using grid engines to accelerate NCBI-BLAST+ and other sequence analysis tools☆11Apr 26, 2020Updated 6 years ago
- defusion☆14Aug 24, 2021Updated 5 years ago
- implement an multi-label algorithm by ranking system through SVM☆13Nov 2, 2018Updated 7 years ago
- PyTorch implementations of protein secondary structure prediction on CB513.☆17Dec 30, 2018Updated 7 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Scripts and documentations on the MCSC decontamination method☆10Jun 13, 2023Updated 3 years ago
- Error correction for Oxford Nanopore data☆47May 29, 2021Updated 5 years ago
- Course materials for the IBioIC Introduction to Bioinformatics training course☆12Jun 4, 2017Updated 9 years ago
- Machine learning to predict future number Covid19 Daily Cases (7-day moving average). Long Short Term Memory (LSTM) Predictor and Reinfor…☆14Feb 21, 2021Updated 5 years ago
- Module to determine where repeats are and make soft-masks of said☆10Mar 14, 2024Updated 2 years ago
- Protein sequence classification with self-supervised pretraining☆82Nov 29, 2021Updated 4 years ago
- Python code to extract features from Protein sequences for Machine Learning/Deep Learning☆21Mar 26, 2022Updated 4 years ago
- 바닥부터 시작하는 R + 바이오인포☆12Nov 28, 2016Updated 9 years ago
- Code accompanying the publication for compressed graph annotation☆13Feb 14, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Code to perform homolog detectability analyses as described in Weisman et al. 2020 (https://www.biorxiv.org/content/10.1101/2020.02.27.96…☆18Nov 18, 2024Updated last year
- Visualising discordant reads☆16Sep 2, 2015Updated 11 years ago
- zzuli Web automatic authentication login☆11Oct 27, 2020Updated 5 years ago
- [WIP] Download full text pdf and supplemental materials for each PubMed IDs.☆14Apr 5, 2017Updated 9 years ago
- BOINC@TACC project: provides a conduit for routing high-throughput computing jobs from TACC resources to the BOINC server.☆14Jul 23, 2021Updated 5 years ago
- PyPEF – Pythonic Protein Engineering Framework☆26Updated this week
- A scaffold assembling pipeline for stLFR reads.☆14Mar 15, 2021Updated 5 years ago
- Protein Secondary Structure predictor using Convolutional Neural Networks☆113Apr 14, 2026Updated 4 months ago
- RNA-seq analysis scripts☆18Jan 8, 2026Updated 8 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- transposable element typing pipeline☆20Mar 8, 2024Updated 2 years ago
- From genomes to phenotypes: Traitar3, the microbial trait analyzer (for Python3)☆21Jul 8, 2024Updated 2 years ago
- Protein Sequence Evolutionary Information Language Model☆14Oct 5, 2023Updated 2 years ago
- Take a list of Pacbio files (.fofn) and creates a spreadsheet for data submission to the sequuence read archive (SRA)☆12Feb 28, 2016Updated 10 years ago
- Derives consensus sequences from a set of long noisy reads by clustering and error correction.☆17Jul 20, 2021Updated 5 years ago
- Sync paired-end FASTA/Q files and keep singleton reads☆19Aug 29, 2026Updated last week
- A mini project for Fundamentals of Optimization course of SoICT - HUST☆17Jun 6, 2023Updated 3 years ago