DeepTTC: a transformer-based model for predicting cancer drug response
☆21Jun 1, 2023Updated 3 years ago
Alternatives and similar repositories for DeepTTC
Users that are interested in DeepTTC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Cancer Drug Response Prediction via a Hybrid Graph Convolutional Network☆105Jun 26, 2023Updated 3 years ago
- ☆10Nov 6, 2023Updated 2 years ago
- Predicting cancer drug response using parallel heterogeneous graph convolutional networks with neighborhood interactions☆10Oct 26, 2022Updated 4 years ago
- Notebooks for CPA figures☆16Dec 9, 2022Updated 3 years ago
- GraphCDR: A graph neural network method with contrastive learning for cancer drug response prediction☆32Sep 27, 2021Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Dataset package for facile training and testing of machine learning/AI algorithms that predict drug response in cancer model systems.☆21Updated this week
- A bi-directional attention neural network for compound–protein interaction and binding affinity prediction.☆35Dec 1, 2022Updated 3 years ago
- Reproducibility repository for CellFlow☆12May 15, 2026Updated 5 months ago
- A deep generative neural network based approach to impute drug response☆21May 30, 2021Updated 5 years ago
- Junction-tree variational auto-encoder for Python 3 (https://arxiv.org/abs/1802.04364)☆12Apr 7, 2021Updated 5 years ago
- VEGA: VAE Enhanced by Gene Annotations☆18May 5, 2022Updated 4 years ago
- ☆28May 22, 2020Updated 6 years ago
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆53Feb 11, 2026Updated 8 months ago
- The web application for the crowdsourced gene expression signatures: http://amp.pharm.mssm.edu/creeds/☆11Jul 6, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- MMGCN：Multi-view Multichannel Attention Graph Convolutional Network for miRNA-disease Association Prediction☆20Apr 7, 2021Updated 5 years ago
- Applying JEPA based architectures to bio☆17Aug 13, 2026Updated 2 months ago
- Coherent Deconfounding Autoencoder (CODE-AE) can extract both common biological signals shared by incoherent samples and private represen…☆20Oct 1, 2024Updated 2 years ago
- Package to preprocess ontologies and train OntoVAE models.☆16Jan 7, 2025Updated last year
- ☆31Feb 22, 2022Updated 4 years ago
- ☆17Jul 8, 2024Updated 2 years ago
- A visible neural network model for drug response prediction☆154Sep 13, 2023Updated 3 years ago
- Implementation of deep random forests. Also contains random subspace forests and X-of-N forests.☆11Dec 20, 2022Updated 3 years ago
- Supervised Training of Conditional Monge Maps☆20Oct 30, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Code to replicate "Learning and actioning general principles of cancer cell drug sensitivity"☆13May 16, 2025Updated last year
- A suite of scientific workflows to assess metrics to compare efficacy of protein-based tumor deconvolution algorithms.☆16Jul 6, 2026Updated 3 months ago
- ☆15Nov 23, 2023Updated 2 years ago
- Open-source foundation models for multi-omics representation learning☆45Jun 3, 2026Updated 5 months ago
- Molecular Data Provider☆10Sep 24, 2026Updated last month
- ☆17Oct 15, 2026Updated 2 weeks ago
- code repository for Hutchins et al. "Reconstructing signaling history of single cells via statistical inference" (2025)☆13Sep 19, 2026Updated last month
- ☆13Dec 23, 2021Updated 4 years ago
- MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction☆54Sep 22, 2020Updated 6 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Understanding sequence conservation with deep learning☆20Mar 19, 2017Updated 9 years ago
- Code for the manuscript: Compressed phenotypic screening empowers scalable biological discovery.☆10Apr 17, 2024Updated 2 years ago
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆64Jul 22, 2024Updated 2 years ago
- tensorflow implemention of StackDenosingAutoEncoder☆11Jun 1, 2017Updated 9 years ago
- Decoding Single-Cell Omics of Perturbation Responses Using DeSCOPE☆29Sep 21, 2026Updated last month
- Inferring disease-associated miRNAs☆10Mar 21, 2020Updated 6 years ago
- End-to-end pipeline for segmenting cell nuclei on histology slides☆16Jul 19, 2022Updated 4 years ago