DeepTTC: a transformer-based model for predicting cancer drug response
☆21Jun 1, 2023Updated 3 years ago
Alternatives and similar repositories for DeepTTC
Users that are interested in DeepTTC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Cancer Drug Response Prediction via a Hybrid Graph Convolutional Network☆104Jun 26, 2023Updated 2 years ago
- PyTorch implementation of "TGSA: Protein-Protein Association-Based Twin Graph Neural Networks for Drug Response Prediction with Similarit…☆23Dec 15, 2021Updated 4 years ago
- Core code for the paper "A deep learning model for drug response prediction from cancer genomic signatures and compound chemical structur…☆22Sep 21, 2021Updated 4 years ago
- GraphCDR: A graph neural network method with contrastive learning for cancer drug response prediction☆32Sep 27, 2021Updated 4 years ago
- A deep generative neural network based approach to impute drug response☆21May 30, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆30May 22, 2020Updated 6 years ago
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆53Feb 11, 2026Updated 4 months ago
- A visible neural network model for drug response prediction☆157Sep 13, 2023Updated 2 years ago
- A suite of scientific workflows to assess metrics to compare efficacy of protein-based tumor deconvolution algorithms.☆16Jan 15, 2024Updated 2 years ago
- ☆17Jul 8, 2024Updated last year
- ☆15May 6, 2024Updated 2 years ago
- ☆15Nov 23, 2023Updated 2 years ago
- A deep learning framework for high-throughput mechanism-driven phenotype screening☆58Mar 27, 2021Updated 5 years ago
- tensorflow implemention of StackDenosingAutoEncoder☆11Jun 1, 2017Updated 9 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆13Dec 23, 2021Updated 4 years ago
- Implementation of deep random forests. Also contains random subspace forests and X-of-N forests.☆11Dec 20, 2022Updated 3 years ago
- MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction☆54Sep 22, 2020Updated 5 years ago
- A context aware tool for proteasomal cleavage predictions☆16May 30, 2025Updated last year
- ☆10Nov 29, 2022Updated 3 years ago
- Deep learning tools for peptide substrate prediction and generation☆44Nov 20, 2025Updated 6 months ago
- An API wrapper for snpedia.com in Python/Flask.☆26Feb 5, 2014Updated 12 years ago
- Understanding sequence conservation with deep learning☆20Mar 19, 2017Updated 9 years ago
- Inferring disease-associated miRNAs☆10Mar 21, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆31Feb 22, 2022Updated 4 years ago
- PyIOmica (pyiomica) is a Python package for omics analyses.☆16Oct 6, 2025Updated 8 months ago
- 3D molecular fingerprints (E3FP) paper repo☆15Mar 14, 2021Updated 5 years ago
- Imputing Single-cell RNA-seq data by combining Graph Convolution and Autoencoder Neural Networks☆20Jun 21, 2024Updated last year
- ☆11Feb 14, 2019Updated 7 years ago
- ☆36Jun 3, 2021Updated 5 years ago
- Causal discovery of gene regulatory programs from single-cell genomics☆19Sep 5, 2025Updated 9 months ago
- TransDTI: Transformer-based language models for estimating DTIs and building a drug-recommendation workflow☆13Oct 26, 2022Updated 3 years ago
- HoTS: Sequence-based prediction of binding regions and drug-target interactions.☆29Nov 6, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A Python interface to the Feature Selection Toolkit, contains JMI, BetaGamma, CMIM, CondMI, DISR, ICAP, and mRMR☆19Oct 28, 2014Updated 11 years ago
- NeurIPS 2022 paper, SubHypergraph Inductive Neural nEtwork☆19Aug 4, 2023Updated 2 years ago
- Codes and datasets for the paper entitle "Predicting microRNA-disease associations from lncRNA-microRNA interactions via multi-view multi…☆11Dec 3, 2019Updated 6 years ago
- ☆10Mar 23, 2024Updated 2 years ago
- Test genes for Spatial Variation☆15Dec 20, 2024Updated last year
- A Python toolbox for structural identifiability and observability analysis of nonlinear models☆14Apr 21, 2022Updated 4 years ago
- An interpretable and flexible deep learning framework for single-T cell transcriptome and receptor analysis☆16Updated this week