jianglikun / DeepTTC
DeepTTC: a transformer-based model for predicting cancer drug response
☆16Updated last year
Alternatives and similar repositories for DeepTTC:
Users that are interested in DeepTTC are comparing it to the libraries listed below
- A deep generative neural network based approach to impute drug response☆20Updated 3 years ago
- A deep learning framework for high-throughput mechanism-driven phenotype screening☆49Updated 4 years ago
- A Deep Learning based Efficacy Prediction System for drug discovery☆66Updated 2 years ago
- ☆28Updated 3 months ago
- Interpretable identification of cancer genes across biological networks via transformer-powered graph representation learning☆17Updated last month
- MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction☆54Updated 4 years ago
- ☆34Updated 2 years ago
- ☆19Updated last year
- ☆11Updated last year
- ☆17Updated 2 years ago
- ☆44Updated 3 years ago
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆51Updated 11 months ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆68Updated 2 years ago
- Contextual AI models for single-cell protein biology☆85Updated 2 months ago
- PyTorch implementation of "TGSA: Protein-Protein Association-Based Twin Graph Neural Networks for Drug Response Prediction with Similarit…☆24Updated 3 years ago
- Machine learning models for antibody sequences in PyTorch☆39Updated 3 years ago
- DeePhase predictor of homotypic liquid-liquid phase separation of proteins & the code associated with the paper "Learning the molecular g…☆16Updated 3 years ago
- ☆17Updated 7 months ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- Supplementary code for the paper: Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19☆27Updated 4 years ago
- ☆40Updated last month
- ☆21Updated 2 years ago
- L1000 peak deconvolution based on Bayesian analysis☆25Updated 3 years ago
- ☆49Updated last year
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆52Updated last year
- Large language modeling applied to T-cell receptor (TCR) sequences.☆53Updated 3 years ago
- Network-based project to explore gene connectivity through biological scales☆23Updated 6 months ago
- TEIM: TCR-Epitope Interaction Modeling☆48Updated last year
- PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturb…☆46Updated 4 months ago
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆30Updated last year