TencentAILabHealthcare / MLA-GNNView external linksLinks
☆44Dec 11, 2024Updated last year
Alternatives and similar repositories for MLA-GNN
Users that are interested in MLA-GNN are comparing it to the libraries listed below
Sorting:
- ☆16Jan 30, 2026Updated 2 weeks ago
- scPretrain: Multi-task self-supervised learning for cell type classification☆23Dec 24, 2021Updated 4 years ago
- Benchmark gene representations from different model families☆14May 29, 2025Updated 8 months ago
- LLM for genomic☆14Feb 23, 2024Updated last year
- ☆12Feb 10, 2023Updated 3 years ago
- SALMON: Survival Analysis Learning with Multi-Omics Neural Networks☆67Oct 26, 2024Updated last year
- Survival Prediction for Gastric Cancer via Multimodal Learning of Whole Slide Images and Gene Expression -- BIBM 2022☆15Dec 6, 2022Updated 3 years ago
- An atlas of CRISPR-Cas systems from systematic genome mining☆25Aug 5, 2025Updated 6 months ago
- A Point Transformer with Federated Learning for HER2 Status Prediction☆17Apr 24, 2025Updated 9 months ago
- A supervised learning model based on Graph Neural Network to predict gene co-expression from chromatin contacts☆12Mar 22, 2023Updated 2 years ago
- Workflow to reproduce results and figures for the second BeatAML manuscript☆14Jun 28, 2022Updated 3 years ago
- Interpretable convolutional neural networks on multi-omics data predict long-term survival in glioblastoma☆15Jun 30, 2023Updated 2 years ago
- Graph Neural Network model for survival analysis from multi-omics data☆14Mar 9, 2022Updated 3 years ago
- resVAE is a restricted latent variational autoencoder that we wrote to uncover hidden structures in gene expression data, especially usin…☆12Jan 30, 2023Updated 3 years ago
- The ‘Cancer-Prognosis-Analysis’ aims to provide prognosis-related codes for further studies. ALL of them are used just for research, but …☆12May 11, 2025Updated 9 months ago
- TCGA Benchmark Tasks for Clinical Attribute Prediction based on Genome☆14Mar 16, 2021Updated 4 years ago
- A command-line interface and python module for R's GSVA bioconductor package☆13Jul 8, 2018Updated 7 years ago
- Differential expression analysis: DESeq2, edgeR, limma. Realized in python based on rpy2☆15May 7, 2021Updated 4 years ago
- using graph convolutional neural network and spaital transcriptomics data to infer cell-cell interactions☆55Jun 15, 2021Updated 4 years ago
- ☆30Aug 18, 2023Updated 2 years ago
- Explaining the genetic causality for complex diseases by deep association kernel learning☆15May 7, 2021Updated 4 years ago
- Computational identification of targets for CAR-T cell therapy in AML☆21Dec 25, 2022Updated 3 years ago
- Graph attention-based fusion of pathology images and gene expression for prediction of cancer survival☆13Dec 11, 2024Updated last year
- Analysis notebooks and data for AML hierarchies paper☆17Jun 28, 2023Updated 2 years ago
- First commit☆65Jul 5, 2022Updated 3 years ago
- ☆16Feb 11, 2021Updated 5 years ago
- ☆20Jan 27, 2021Updated 5 years ago
- ISMB 2020: Improved survival analysis by learning shared genomic information from pan-cancer data☆17Jul 13, 2020Updated 5 years ago
- MeDuSA is a fine-resolution cellular deconvolution method that leverages scRNA-seq data as a reference to estimate cell-state abundance i…☆43Feb 20, 2025Updated 11 months ago
- MOGONET (Multi-Omics Graph cOnvolutional NETworks) is a novel multi-omics data integrative analysis framework for classification tasks in…☆175Mar 31, 2021Updated 4 years ago
- MOMA: A Multi-task Attention Learning Algorithm for Multi-omics Data Interpretation and Classification☆18Apr 10, 2023Updated 2 years ago
- ☆56Dec 5, 2024Updated last year
- ☆347Dec 13, 2023Updated 2 years ago
- Core code for the paper "A deep learning model for drug response prediction from cancer genomic signatures and compound chemical structur…☆22Sep 21, 2021Updated 4 years ago
- Code for replicating results presented in the paper: "Quantifying Explainers of Graph Neural Networks in Computational Pathology"☆45May 19, 2021Updated 4 years ago
- MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction☆55Sep 22, 2020Updated 5 years ago
- "ZINB-based Graph Embedding Autoencoder for Single-cell RNA-seq Interpretations" in AAAI 2022☆25Feb 5, 2023Updated 3 years ago
- netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data☆23Apr 19, 2021Updated 4 years ago
- Multigrate: multiomic data integration for single-cell genomics☆30Updated this week