TCGA Benchmark Tasks for Clinical Attribute Prediction based on Genome
☆14Mar 16, 2021Updated 5 years ago
Alternatives and similar repositories for TCGA_Benchmark
Users that are interested in TCGA_Benchmark are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This repo contains source code and datasets used in code for Deep transfer learning enables lesion tracing of circulating tumor cells(CTC…☆12Jun 26, 2023Updated 3 years ago
- Code Repo for Doctor2vec☆11Jan 23, 2020Updated 6 years ago
- ☆18Feb 15, 2020Updated 6 years ago
- Deep Learning Based Tumor Type Classification Using Gene Expression Data☆26Sep 17, 2024Updated last year
- PaNeV: an R package for a pathway-based network visualization☆10Aug 25, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Pytorch implementation for Meta-SPL (self-paced learning).☆19Jul 8, 2020Updated 6 years ago
- NRPSpredictor2 is a program to predict the specificity of bacterial and fungal adenylation domains.☆12Oct 7, 2019Updated 6 years ago
- This repository contains the source code of the revised version of MutPanning. MutPanning is publicly available under the BSD3-Clause ope…☆14Nov 12, 2019Updated 6 years ago
- End-to-end deep learning model for low dimensional latent space extraction and multi-class classification on multi-omics datasets.☆36Jun 30, 2021Updated 5 years ago
- Codebase for "Clairvoyance: a Unified, End-to-End AutoML Pipeline for Medical Time Series"☆12Nov 1, 2020Updated 5 years ago
- ☆12May 25, 2025Updated last year
- Raw data and analysis of scRNA Seq experiments for the paper Multimodal Mapping of the Immune Landscape in Human Pancreatic Cancer. This …☆15Nov 30, 2020Updated 5 years ago
- Pathway-Level Information Extractor (PLIER): a generative model for gene expression data☆57Aug 30, 2024Updated 2 years ago
- Lung cancer 10X analysis☆11Dec 30, 2020Updated 5 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆12Dec 4, 2023Updated 2 years ago
- scPretrain: Multi-task self-supervised learning for cell type classification☆24Dec 24, 2021Updated 4 years ago
- This is the repository for paper titled as "Convolutional neural network models for cancer type prediction based on gene expression".☆12Dec 9, 2020Updated 5 years ago
- Source code of the paper "DeepGene: an advanced cancer type classifier based on deep learning and somatic point mutations"☆13Sep 7, 2017Updated 8 years ago
- ☆12Mar 20, 2024Updated 2 years ago
- OncoNetExplainer: Explainable Prediction of Cancer Types Based on Gene Expression Data☆11Feb 28, 2023Updated 3 years ago
- Unsupervised fingerprinting of disordered solids leading to analogical materials discovery.☆10Feb 14, 2023Updated 3 years ago
- Downloading and Creating labels for the TCGA lung Whole Slide Images☆12Feb 29, 2024Updated 2 years ago
- Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)☆16Apr 13, 2026Updated 4 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- The MolE pre-training framework to learn general molecular representations from unlabeled structures☆12May 26, 2025Updated last year
- Predict binding affinity of ligand-protein complexes using Graph Neural Networks. The model is implemented using PyTorch Geometric and ba…☆11Nov 26, 2022Updated 3 years ago
- Here you can find (just about) all of the diagrams I've ever made in LaTeX using TikZ (and Pgfplots).☆16Jan 21, 2020Updated 6 years ago
- An et al. Nature Communications 2023☆15Jan 19, 2023Updated 3 years ago
- JAX implementation of Graph Attention Networks☆13Jan 29, 2022Updated 4 years ago
- ☆17Feb 11, 2021Updated 5 years ago
- Code for "Invariance Learning in Deep Neural Networks with Differentiable Laplace Approximations"☆22Nov 16, 2022Updated 3 years ago
- Quantum-Wise VNL Application for Perovskite Building and Machine Learning☆12May 14, 2020Updated 6 years ago
- ☆18Sep 28, 2015Updated 10 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆22Sep 4, 2020Updated 5 years ago
- ☆20Oct 22, 2020Updated 5 years ago
- Automated reaction discovery and dataset generation with the growing string method