TCGA Benchmark Tasks for Clinical Attribute Prediction based on Genome
☆14Mar 16, 2021Updated 5 years ago
Alternatives and similar repositories for TCGA_Benchmark
Users that are interested in TCGA_Benchmark are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code Repo for Doctor2vec☆11Jan 23, 2020Updated 6 years ago
- This repo contains source code and datasets used in code for Deep transfer learning enables lesion tracing of circulating tumor cells(CTC…☆12Jun 26, 2023Updated 2 years ago
- ☆18Feb 15, 2020Updated 6 years ago
- Multi-layer Recurrent Neural Networks (LSTM) for character-level language models in Python using Tensorflow☆15Jan 13, 2018Updated 8 years ago
- Convert VCF (Variant Call Format) into TCGA MAF (Mutation Annotation Format)☆15Jul 15, 2016Updated 9 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Pytorch implementation for Meta-SPL (self-paced learning).☆19Jul 8, 2020Updated 5 years ago
- This repository contains the source code of the revised version of MutPanning. MutPanning is publicly available under the BSD3-Clause ope…☆13Nov 12, 2019Updated 6 years ago
- End-to-end deep learning model for low dimensional latent space extraction and multi-class classification on multi-omics datasets.☆35Jun 30, 2021Updated 4 years ago
- Codebase for "Clairvoyance: a Unified, End-to-End AutoML Pipeline for Medical Time Series"☆13Nov 1, 2020Updated 5 years ago
- Deep Learning Based Tumor Type Classification Using Gene Expression Data☆27Sep 17, 2024Updated last year
- ☆11May 25, 2025Updated last year
- It is about how to load and aggregate pretrained word embeddings in pytorch, e.g., ELMo\BERT\XLNET.☆12Mar 2, 2020Updated 6 years ago
- Lung cancer 10X analysis☆11Dec 30, 2020Updated 5 years ago
- Pathway-Level Information Extractor (PLIER): a generative model for gene expression data☆56Aug 30, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆12Dec 4, 2023Updated 2 years ago
- scPretrain: Multi-task self-supervised learning for cell type classification☆24Dec 24, 2021Updated 4 years ago
- This is the repository for paper titled as "Convolutional neural network models for cancer type prediction based on gene expression".☆12Dec 9, 2020Updated 5 years ago
- nlp metrics☆11Apr 5, 2018Updated 8 years ago
- ☆12Mar 20, 2024Updated 2 years ago
- repository with the scripts to run examples of the publications with new functionalities of TCGAbiolinks☆17Mar 2, 2022Updated 4 years ago
- Unsupervised fingerprinting of disordered solids leading to analogical materials discovery.☆10Feb 14, 2023Updated 3 years ago
- Downloading and Creating labels for the TCGA lung Whole Slide Images☆12Feb 29, 2024Updated 2 years ago
- Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)☆16Apr 13, 2026Updated last month
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- The MolE pre-training framework to learn general molecular representations from unlabeled structures☆12May 26, 2025Updated last year
- Here you can find (just about) all of the diagrams I've ever made in LaTeX using TikZ (and Pgfplots).☆16Jan 21, 2020Updated 6 years ago
- The Python 3 library for Multi-Criteria Decision Analysis.☆12Jun 3, 2026Updated last week
- ☆16Feb 11, 2021Updated 5 years ago
- ImmuCellAI (Immune Cell Abundance Identifier) is a tool to estimate the abundance of 24 immune cells from gene expression dataset includi…☆18May 25, 2025Updated last year
- Deep learning-based pseudo mass spectrometry imaging☆14Jul 2, 2022Updated 3 years ago
- JAX implementation of Graph Attention Networks☆13Jan 29, 2022Updated 4 years ago
- ☆18Sep 28, 2015Updated 10 years ago
- Automated reaction discovery and dataset generation with the growing string method☆22Feb 6, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Sparse Linear Regression Models☆20Jun 1, 2026Updated last week
- Code for Nature Scientific Reports 2020 paper: "Unsupervised generative and graph neural methods for modelling cell differentiation" by I…