zhao-ht / BioMazeLinks
☆17Updated 4 months ago
Alternatives and similar repositories for BioMaze
Users that are interested in BioMaze are comparing it to the libraries listed below
Sorting:
- BioDiscoveryAgent is an LLM-based AI agent for closed-loop design of genetic perturbation experiments☆74Updated last week
- A virtual lab of LLM agents for science research☆185Updated last month
- ChatCell: Facilitating Single-Cell Analysis with Natural Language☆51Updated last month
- Evaluation dataset for AI systems intended to benchmark capabilities foundational to scientific research in biology☆66Updated last month
- Retrieved Sequence Augmentation for Protein Representation Learning☆53Updated last year
- ProCyon: A multimodal foundation model for protein phenotypes☆35Updated 4 months ago
- ☆37Updated 3 months ago
- Benchmark for LLM-based Agents in Computational Biology☆46Updated last month
- Repository for mRNA Paper and CodonBERT publication.☆130Updated last year
- Orthrus is a mature RNA model for RNA property prediction. It uses a mamba encoder backbone, a variant of state-space models specifical…☆66Updated 5 months ago
- Madrigal: Multimodal AI predicts clinical outcomes of drug combinations from preclinical data☆29Updated 3 months ago
- Large Language Models in Protein: A Comprehensive Survey☆101Updated 3 months ago
- AI-Driven Digital Organism (AIDO) is a system of multiscale foundation models for predicting, simulating and programming biology at all l…☆99Updated 2 months ago
- ☆33Updated 2 years ago
- A Biological Foundation Model Bridging the Gap between Molecular Sequences Through Central Dogma☆27Updated 4 months ago
- ☆25Updated 5 years ago
- The code for "Learning Molecular Representation in a Cell"☆34Updated 4 months ago
- BioT5 (EMNLP 2023) and BioT5+ (ACL 2024 Findings)☆114Updated 10 months ago
- Contrastive learning harmonizing protein language models and natural language models☆32Updated last year
- [NeurIPS 2024] BEACON: Benchmark for Comprehensive RNA Tasks and Language Models☆45Updated 11 months ago
- A curated list of LLM powered AI Agents in Biomedical Research. Medical Image Analysis, Multi-omics Genomics Analysis, Biomedical Scienti…☆38Updated 7 months ago
- AIDO.ModelGenerator is a software stack powering the development of an AI-driven Digital Organism (AIDO) by enabling researchers to adapt…☆76Updated last month
- Primary RNA sequence model☆38Updated last year
- ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…☆51Updated 2 months ago
- ☆26Updated last year
- Sequential Optimal Experimental Design of Perturbation Screens Guided by Multimodal Priors☆40Updated last year
- Combinatorial prediction of therapeutic perturbations using causally-inspired neural networks☆28Updated 2 months ago
- ☆26Updated 6 months ago
- Gene expression time-series extrapolation for heterogeneous data☆17Updated 2 years ago
- Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…☆64Updated last year