mskspi / PathCNN
Interpretable convolutional neural networks on multi-omics data predict long-term survival in glioblastoma
☆15Updated last year
Alternatives and similar repositories for PathCNN:
Users that are interested in PathCNN are comparing it to the libraries listed below
- ☆43Updated 5 months ago
- SALMON: Survival Analysis Learning with Multi-Omics Neural Networks☆67Updated 6 months ago
- Pathway-based sparse deep neural network for survival analysis☆38Updated last year
- DCAP:Integrating multi-omics data with deep learning for predicting cancer prognosis☆21Updated 4 years ago
- Deep-Learning framework for multi-omic and survival data integration☆82Updated last year
- Multi-task deep learning framework for multi-omics data analysis☆45Updated 3 years ago
- ☆34Updated 3 years ago
- GNN-based cancer prognosis prediction using image-derived Cell-Graphs☆11Updated 3 years ago
- Deep Learning with Multimodal Representation for Pancancer Prognosis Prediction☆87Updated 6 years ago
- [The Lancet Digital Health, MICCAI2020 Oral] The official code of "Spatially-aware Graph Neural Networks and Cross-level Molecular Profil…☆26Updated last year
- ☆54Updated 2 years ago
- MOMA: A Multi-task Attention Learning Algorithm for Multi-omics Data Interpretation and Classification☆16Updated 2 years ago
- Self-supervised representation learning combining GTEx histology, RNA-seq and WGS☆29Updated last month
- ☆11Updated 5 years ago
- Scripts for data processing☆43Updated 11 months ago
- OncoNetExplainer: Explainable Prediction of Cancer Types Based on Gene Expression Data☆11Updated 2 years ago
- Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis☆76Updated 4 years ago
- ☆18Updated last month
- ☆27Updated 2 years ago
- ☆19Updated last year
- Train a model to predict gene expression from histology slides.☆100Updated 2 years ago
- ☆40Updated 3 years ago
- End-to-end deep learning model for low dimensional latent space extraction and multi-class classification on multi-omics datasets.☆34Updated 3 years ago
- HiGCN: a hierarchical graph convolution network for representation learning of gene expression data☆11Updated 4 years ago
- Data and code to accompany our Nature publication☆46Updated 3 years ago
- A package to estimate biological organ age using SomaScan plasma proteomics data☆51Updated 11 months ago
- HCC_Deep_learning☆19Updated 4 years ago
- ☆15Updated 4 years ago
- P-NET, Biologically informed deep neural network for prostate cancer classification and discovery☆150Updated 3 years ago
- Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning☆76Updated 6 months ago