A command-line interface and python module for R's GSVA bioconductor package
☆14Jul 8, 2018Updated 8 years ago
Alternatives and similar repositories for GSVA
Users that are interested in GSVA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Scripts for the analysis of TT-seq and DRB/TT-seq data.☆12Mar 11, 2020Updated 6 years ago
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆39Jul 10, 2024Updated 2 years ago
- Single sample pathway analysis tools for omics data☆15Nov 9, 2024Updated last year
- personal genome constructor☆11May 29, 2025Updated last year
- ☆18Sep 1, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A library for the deconvolution of bulk cell samples using single-cell RNA expression data.☆23Nov 3, 2021Updated 4 years ago
- Find Co-Abundant Groups of Genes☆12Aug 3, 2020Updated 6 years ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Feb 11, 2022Updated 4 years ago
- ☆21Mar 2, 2026Updated 5 months ago
- Dirichlet-Multinomial Bayesian Variable Selection☆14Jun 13, 2024Updated 2 years ago
- A Java package for non-invasive cancer diagnosis using methylation profiles of cell-Free DNA.☆17Apr 2, 2019Updated 7 years ago
- kmdata: A Database of Reconstructed Individual Patient Level Data from 153 Oncology Clinical Trials☆15May 27, 2025Updated last year
- A shell to facilitate loading / running CIBERSORT software in structured environments☆25May 9, 2018Updated 8 years ago
- ProteoStorm: An Ultrafast Metaproteomics Database Search Framework☆11Jul 15, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- 命例☆10Sep 27, 2018Updated 7 years ago
- Converter functions for the MSstats package☆11Aug 5, 2026Updated last week
- Statistical power studies for multi-omics experiments.☆34Jan 18, 2025Updated last year
- Fontanka is a set of tools to work with fountains in Hi-C data. It aims to provide a flexible Python API and specialized CLI for calling …☆14Dec 22, 2025Updated 7 months ago
- Deep proteome inference from peptide profiles☆13Jul 16, 2020Updated 6 years ago
- Red-C data processing☆15Apr 18, 2023Updated 3 years ago
- "ZINB-based Graph Embedding Autoencoder for Single-cell RNA-seq Interpretations" in AAAI 2022☆28Feb 5, 2023Updated 3 years ago
- Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces☆41Sep 17, 2021Updated 4 years ago
- ☆13Aug 4, 2026Updated 2 weeks ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Haplotype phaser for next-generation sequencing data☆13Jan 13, 2022Updated 4 years ago
- Classifying RNAs as lncRNAs by ensemble machine learning algorithms☆10Dec 8, 2022Updated 3 years ago
- Python utilities for building integrated views of TCGA data.☆32Mar 25, 2018Updated 8 years ago
- Manipulate KEGG networks as NetworkX objects in in Python☆10Jan 21, 2022Updated 4 years ago
- SIP: Significant Interaction Peak caller☆17Apr 24, 2025Updated last year
- UNet script, model, sample data☆14Feb 19, 2025Updated last year
- Extension for profiling performance of JupyterLab UI for JupyterLab core developers, extension developers, and advanced users.☆14Jul 3, 2026Updated last month
- The nPYc-Toolbox defines objects for representing, and implements functions to manipulate and display, metabolic profiling datasets.☆25Jul 23, 2026Updated 3 weeks ago
- a simple R data package for curated cancer pathway-specific gene lists☆13Mar 31, 2020Updated 6 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Simple scVI implementation☆13Aug 10, 2026Updated last week
- Harmonizing pathway databases using Biological Expression Language (BEL)☆20Jul 1, 2024Updated 2 years ago
- pythonic ggplot image combinations https://benjaminleroy.github.io/cowpatch☆10Feb 12, 2023Updated 3 years ago
- A simple tool to perform the calculation and visualization of the average chromatin A/B compartment.☆15Apr 24, 2026Updated 3 months ago
- The Self-Assembling-Manifold (SAM) algorithm.☆49Dec 26, 2025Updated 7 months ago
- The SpatialDecon library implements the SpatialDecon algorithm for mixed cell deconvolution in spatial gene expression datasets. (This al…☆43Feb 5, 2026Updated 6 months ago
- Python toolbox for multi-omics data mapping and analysis☆29Apr 13, 2023Updated 3 years ago