Alternatives and similar repositories for cellmarkeraccordion

Users that are interested in cellmarkeraccordion are comparing it to the libraries listed below

• guokai8 / scGSVA
  scGSVA: Perform GSVA for single cell RNA seq
  ☆70Updated last week
• JinmiaoChenLab / ezSingleCell2
  ☆57Updated 2 years ago
• abelson-lab / scATOMIC
  Pan-Cancer Single Cell Classifier
  ☆83Updated last year
• KChen-lab / METAFlux
  ☆85Updated last year
• alexyermanos / Platypus
  R package for the analysis of single-cell immune repertoires
  ☆43Updated last year
• immunogenomics / starCAT
  Implements *CellAnnotator (aka *CAT/starCAT), annotating scRNA-Seq with predefined gene expression programs
  ☆95Updated last week
• junjunlab / bulkPseudotime
  Pseudotime Analysis for Bulk Data
  ☆18Updated last year
• BostonGene / Kassandra
  Bostongene cell deconvolution algorithm from RNAseq
  ☆60Updated 2 years ago
• saezlab / CollecTRI
  Gene regulatory network containing signed transcription factor-target gene interactions
  ☆97Updated 8 months ago
• omnideconv / spacedeconv
  A unified interface to spatial transcriptomics deconvolution tools
  ☆45Updated last week
• genecell / COSG
  Accurate and fast cell marker gene identification with COSG
  ☆54Updated 2 weeks ago
• kerseviciute / aPEAR
  Enrichment Networks for Pathway Enrichment Analysis
  ☆68Updated 2 years ago
• GfellerLab / SuperCell
  Coarse-graining of large single-cell RNA-seq data into metacells
  ☆92Updated last month
• Coolgenome / iTALK
  ☆65Updated 6 years ago
• NIH-NEI / SCassist
  SCassist : An AI Based Workflow Assistant for Single-Cell Analysis
  ☆31Updated 5 months ago
• Teichlab / drug2cell
  Gene group activity utility functions for Scanpy
  ☆100Updated last year
• saezlab / progeny
  R package for Pathway RespOnsive GENe activity inference
  ☆114Updated 3 years ago
• SGI-LungCancer / SingleCell
  Code repository for single cell RNA-seq
  ☆40Updated 5 years ago
• ZJUFanLab / CellTalkDB
  A manually curated database of literature-supported ligand-receptor interactions in human and mouse
  ☆32Updated last year
• xmc811 / Scillus
  R Package for Single-Cell Dataset Processing and Visualization
  ☆66Updated 4 years ago
• HaojiaWu / plot1cell
  A R package for advanced single cell data viz
  ☆73Updated 5 months ago
• omnideconv / omnideconv
  Unified access to several second-generation deconvolution methods
  ☆91Updated last month
• lmw123 / DISCOtoolkit
  ☆37Updated 3 months ago
• liulab-dfci / RIMA_pipeline
  ☆90Updated 5 months ago
• xiebb123456 / AutomaticCellTypeIdentification
  ☆19Updated 3 years ago
• Teichlab / Genes2Genes
  Aligning gene expression trajectories of single-cell reference and query systems
  ☆81Updated 5 months ago
• cssmillie / ulcerative_colitis
  ☆64Updated 5 years ago
• Zaoqu-Liu / BioEnricher
  Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer
  ☆82Updated 2 years ago
• bischofp / single_cell_lung_adenocarcinoma
  ☆32Updated 4 years ago
• HuangLabUMN / oncoPredict
  An R package for drug response prediction and drug-gene association prediction.
  ☆25Updated 8 months ago