Segmentation-free Analysis of In Situ Capture data
☆14Jul 6, 2026Updated 2 weeks ago
Alternatives and similar repositories for sainsc
Users that are interested in sainsc are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Repo with analysis code for the vascular atlas paper☆10Nov 22, 2024Updated last year
- Cell identification in high-resolution Spatial Transcriptomics☆15Dec 3, 2025Updated 7 months ago
- My notes for Prof. Klaus Obermayer's "Machine Intelligence 2 - Unsupervised Learning" course at the TU Berlin☆14Mar 23, 2023Updated 3 years ago
- ANS_signature_scoring: A gene expression signature scoring Python package.☆19Jan 18, 2026Updated 6 months ago
- Implementation of multiplex Leiden for analysis of spatial omics data☆22Jul 7, 2026Updated 2 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- cross-species analysis of cell identities, markers and regulations☆13Jul 11, 2025Updated last year
- ☆12Mar 5, 2024Updated 2 years ago
- ☆35Jan 3, 2025Updated last year
- Cell-type Assignment and Module Extraction based on a heterogeneous graph neural network.☆10Oct 30, 2023Updated 2 years ago
- Cell-type Assignment and Module Extraction based on a heterogeneous graph neural network.☆13Jan 27, 2024Updated 2 years ago
- ☆11Oct 21, 2025Updated 9 months ago
- Code generated by Evelyn Fitzsimons (Regmefi)☆11Aug 30, 2024Updated last year
- A Python interface for NIH Reporter APIs☆12Feb 4, 2025Updated last year
- ☆15Jun 13, 2025Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆13Nov 3, 2023Updated 2 years ago
- ☆12May 24, 2024Updated 2 years ago
- R package for distance- and density-based outlier detection☆12May 28, 2019Updated 7 years ago
- MusMorph, a database of standardized mouse morphology data for morphometric meta-analyses.☆12Jul 25, 2024Updated 2 years ago
- Cross-correlation coefficients in Python☆13Sep 22, 2017Updated 8 years ago
- Querying cellular states and programs by learning representations of gene sets☆16Nov 2, 2025Updated 8 months ago
- Containerized cancer subtype prediction tools for gene expression, miRNA, DNA methylation, somatic mutations and copy number variation.☆36Apr 9, 2025Updated last year
- resVAE is a restricted latent variational autoencoder that we wrote to uncover hidden structures in gene expression data, especially usin…☆13Jan 30, 2023Updated 3 years ago
- scDoRI (single-cell Deep multi-Omic Regulatory Inference) is a deep learning model to infer enhancer-mediated gene regulatory networks (e…☆34Aug 20, 2025Updated 11 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Slicer extensions for computing feature maps of N-Dimensional images using well-known texture analysis methods.☆11Mar 24, 2025Updated last year
- ☆38Jun 4, 2024Updated 2 years ago
- The codes and files for the study of subsolid nodules (SSN).☆15Oct 13, 2020Updated 5 years ago
- An m6A-aware basecalling model to detect m6A modifications at single nucleotide resolution in individual reads (Cruciani, Delgado-Tejedo…☆18Sep 1, 2025Updated 10 months ago
- ☆23Jan 10, 2025Updated last year
- Code for spatial subclone paper☆18Jan 23, 2025Updated last year
- Analysis and visualization of RNA-Seq results☆32Updated this week
- The GEO Cancer Analysis Suite (GCAS) is a versatile R package designed for analyzing and visualizing gene expression data in cancer resea…☆22Jun 26, 2026Updated 3 weeks ago
- ☆27Oct 12, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Bash scripts to simplify your life (let's hope so!)☆12Jul 21, 2025Updated last year
- ☆15Feb 28, 2022Updated 4 years ago
- ☆13Jan 23, 2025Updated last year
- ☆10Jan 17, 2023Updated 3 years ago
- ☆34May 31, 2026Updated last month
- Seqscope codes☆11Nov 28, 2021Updated 4 years ago
- A multi-instance learning on pathological images to predict MSI☆14Sep 30, 2020Updated 5 years ago