Alternatives and similar repositories for TransDTI

Users that are interested in TransDTI are comparing it to the libraries listed below

• GIST-CSBL / HoTS
  HoTS: Sequence-based prediction of binding regions and drug-target interactions.
  ☆26Updated 2 years ago
• NasimAbdollahi / NodeCoder
  NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.
  ☆33Updated last year
• pth1993 / DeepCE
  A deep learning framework for high-throughput mechanism-driven phenotype screening
  ☆50Updated 4 years ago
• biomed-AI / GPSite
  Geometry-aware protein binding site predictor
  ☆20Updated 11 months ago
• gv20-therapeutics / antibody-in-pytorch
  Machine learning models for antibody sequences in PyTorch
  ☆40Updated 4 years ago
• gitter-lab / nn4dms
  Neural networks for deep mutational scanning data
  ☆69Updated 2 months ago
• samsledje / ConPLex_dev
  ☆51Updated last year
• TencentAILabHealthcare / ER-BERT
  ☆11Updated last year
• aqlaboratory / hsm
  Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
  ☆70Updated last year
• xinyu-dev / annotate_v
  Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python
  ☆30Updated 2 years ago
• jiangdada1221 / TEINet
  TEINet: a deep learning framework for prediction of TCR-epitope binding specificity
  ☆15Updated 2 years ago
• Superzchen / iFeatureOmega-CLI
  iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…
  ☆34Updated last year
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆60Updated last year
• piercelab / tcrmodel2
  ☆41Updated 4 months ago
• xzenglab / TAGPPI
  ☆20Updated 2 years ago
• kadiliissaar / DeePhase
  DeePhase predictor of homotypic liquid-liquid phase separation of proteins & the code associated with the paper "Learning the molecular g…
  ☆16Updated 3 years ago
• Doudna-lab / GARNET_DL
  ☆36Updated 6 months ago
• gozsari / ProtFeat
  ProtFeat is protein feature extraction tool that utilizes POSSUM and iFeature.
  ☆20Updated 10 months ago
• HarveyYan / RNAonGraph
  A repository for neural representational learning of RNA secondary structures
  ☆32Updated 5 years ago
• kansil / PROBE
  Trainable representation analysis study repository
  ☆43Updated 3 years ago
• Rostlab / bindPredict
  Prediction of binding residues for metal ions, nucleic acids, and small molecules.
  ☆32Updated 7 months ago
• alchemab / antiberta
  Public repository describing training and testing of AntiBERTa.
  ☆60Updated 2 years ago
• dahjan / DMS_opt
  ☆70Updated 4 years ago
• enai4bio / DeepAAI
  DeepAAI
  ☆31Updated 7 months ago
• tymor22 / protein-vec
  Repository for Protein-Vec, a protein embedding mixture of experts model
  ☆38Updated last year
• csi-greifflab / manuscript_insilico_antibody_generation
  ☆23Updated 4 years ago
• AIforGreatGood / biotransfer
  Machine learning-driven antibody design
  ☆60Updated 2 years ago
• leandroradusky / pyfoldx
  pyFoldX: python bindings for FoldX.
  ☆48Updated 3 years ago
• ky66 / ROBIN
  An analysis of a new experimentally-derived nucleic acid binding chemical library
  ☆23Updated 2 years ago
• abelavit / PepCNN
  ☆21Updated last year