samsledje / ConPLex_dev
☆48Updated last year
Alternatives and similar repositories for ConPLex_dev:
Users that are interested in ConPLex_dev are comparing it to the libraries listed below
- ☆68Updated 4 years ago
- Machine learning models for antibody sequences in PyTorch☆39Updated 3 years ago
- ☆62Updated 3 years ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆50Updated 5 months ago
- contrastive learning and pre-trained encoder for protein-ligand binding sites prediction☆30Updated 4 months ago
- Multi-Scale Representation Learning on Proteins (NeurIPS 2021)☆46Updated last year
- Transformer Based Language Model for Peptide Property Prediction☆45Updated 9 months ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆36Updated 2 years ago
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆32Updated 5 months ago
- ☆32Updated last year
- Antibody-Antigen Docking and Affinity Benchmark☆71Updated 4 years ago
- ☆72Updated last year
- Fitness landscapes for antibodies☆68Updated 3 months ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆59Updated 9 months ago
- Pretrainable geometric graph neural network for antibody affinity maturation☆52Updated last month
- Data repository for "Fine-tuning protein language models boosts predictions across diverse tasks"☆37Updated 8 months ago
- Interpretable AI pipeline improving binding predictions for novel protein targets and ligands☆38Updated last year
- ☆76Updated last month
- Code for humanization of antibody and nanobody☆39Updated 5 months ago
- Public repository describing training and testing of AntiBERTa.☆58Updated 2 years ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆113Updated last month
- open source code for Tencent tFold☆97Updated last month
- Efficient implementatin of ESM family.☆55Updated 3 months ago
- A bi-directional attention neural network for compound–protein interaction and binding affinity prediction.☆30Updated 2 years ago
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆57Updated 3 months ago
- A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery☆29Updated 2 weeks ago
- Antibody-specific masked language model☆53Updated last year
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆93Updated last year
- ☆86Updated 2 years ago
- A novel graph neural network strategy with the Vina distance optimization terms to predict protein-ligand binding affinity☆31Updated 11 months ago