Alternatives and similar repositories for ConPLex_dev

Users that are interested in ConPLex_dev are comparing it to the libraries listed below

• CAODH / EquiScore
  ☆74Updated last year
• oxpig / Paragraph
  Antibody paratope prediction using Graph Neural Networks with minimal feature vectors
  ☆37Updated 2 years ago
• jeffreyruffolo / AntiBERTy
  Antibody-specific masked language model
  ☆55Updated last year
• dahjan / DMS_opt
  ☆68Updated 4 years ago
• vsomnath / holoprot
  Multi-Scale Representation Learning on Proteins (NeurIPS 2021)
  ☆46Updated last year
• CSUBioGroup / BACPI
  A bi-directional attention neural network for compound–protein interaction and binding affinity prediction.
  ☆30Updated 2 years ago
• CSUBioGroup / DTIAM
  A unified framework for predicting drug-target interactions, binding affinities and activation/inhibition mechanisms.
  ☆42Updated 3 months ago
• zhaolongNCU / PocketDTA
  PocketDTA
  ☆30Updated 7 months ago
• DeepGraphLearning / S3F
  Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)
  ☆36Updated 6 months ago
• TencentAILabHealthcare / PALM
  ☆44Updated last year
• LPDI-EPFL / masif-neosurf
  MaSIF-neosurf: surface-based protein design for ternary complexes.
  ☆123Updated last week
• BFeng14 / ActFound
  Official implementation for ActFound (Nature Machine Intelligence): A bioactivity foundation model using pairwise meta-learning
  ☆42Updated 7 months ago
• DeepGraphLearning / GearBind
  Pretrainable geometric graph neural network for antibody affinity maturation
  ☆53Updated 2 months ago
• piercelab / antibody_benchmark
  Antibody-Antigen Docking and Affinity Benchmark
  ☆71Updated 4 years ago
• ky66 / ROBIN
  An analysis of a new experimentally-derived nucleic acid binding chemical library
  ☆21Updated 2 years ago
• gv20-therapeutics / antibody-in-pytorch
  Machine learning models for antibody sequences in PyTorch
  ☆39Updated 4 years ago
• KailiWang1 / RLBind
  a deep learning architecture for RNA-ligand binding sites prediction
  ☆18Updated last year
• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆71Updated 4 months ago
• luoyunan / KDBNet
  Kinase–drug binding prediction with calibrated uncertainty quantification
  ☆23Updated last year
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆31Updated last month
• sun-heqi / MultiPPIMI
  A deep learning framework for predicting interactions between protein-protein interaction targets and modulators
  ☆14Updated last year
• CSUBioGroup / GraphscoreDTA
  A novel graph neural network strategy with the Vina distance optimization terms to predict protein-ligand binding affinity
  ☆31Updated last year
• anton-bushuiev / PPIformer
  Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)
  ☆44Updated 4 months ago
• YAndrewL / CLAPE
  contrastive learning and pre-trained encoder for protein-ligand binding sites prediction
  ☆30Updated 5 months ago
• dmis-lab / PerceiverCPI
  Bioinformatics'2022 PerceiverCPI: A nested cross-attention network for compound-protein interaction prediction
  ☆36Updated last year
• mit-ll / AlphaSeq_Antibody_Dataset
  Dataset with quantitative binding scores of scFv-format antibodies against SARS-CoV-2 target peptide
  ☆22Updated 2 years ago
• dfwlab / cyclicpepedia
  ☆18Updated last year
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆59Updated 10 months ago
• RSchmirler / data-repo_plm-finetune-eval
  Data repository for "Fine-tuning protein language models boosts predictions across diverse tasks"
  ☆40Updated 9 months ago
• NasimAbdollahi / NodeCoder
  NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.
  ☆33Updated last year