Snakemake profile for running jobs on an LSF cluster
☆38Jul 29, 2024Updated last year
Alternatives and similar repositories for lsf
Users that are interested in lsf are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Variant call verification☆19May 12, 2025Updated last year
- COBS - Compact Bit-Sliced Signature Index (for Genomic k-Mer Data or q-Grams)☆21Nov 24, 2024Updated last year
- Code to create a PRG from a Multiple Sequence Alignment file☆25Sep 10, 2025Updated 10 months ago
- Single-cell Iso Prep☆17Oct 28, 2023Updated 2 years ago
- ☆12Apr 13, 2020Updated 6 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- The uncompromising Jupyter notebook formatter.☆14Jan 26, 2024Updated 2 years ago
- Map single-cell transcriptomes to copy number evolutionary trees.☆14Aug 18, 2024Updated last year
- Rapid estimation of phylogenetic trees using sketching☆13Feb 18, 2025Updated last year
- Tools for detecting alternative splicing events and genotype in single-cell gene expression data.☆15Jan 16, 2024Updated 2 years ago
- ☆19Nov 24, 2025Updated 8 months ago
- Seamlessly integrate R packages into Python.☆21Apr 12, 2023Updated 3 years ago
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆21Aug 19, 2025Updated 11 months ago
- A Julia package for extracting mutation signatures using topic models☆20Feb 23, 2022Updated 4 years ago
- A python wrapper around SURVIVOR☆20Feb 15, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- fastcat is a single executable with subcommands for FASTQ and BAM summary/statistics workflows. It was originally written to santize and …☆57Mar 4, 2026Updated 4 months ago
- Host depletion optimised for clinical metagenomic sequencing applications☆19Jul 9, 2026Updated 2 weeks ago
- VEP Plugin to annotate high-impact five prime UTR variants☆30Aug 23, 2024Updated last year
- Using reference-free compressed data structures to analyse thousands of human genomes (1000 Genomes ReadServer)☆14Sep 23, 2017Updated 8 years ago
- VILOCA: VIral LOcal haplotype reconstruction and mutation CAlling for short and long read data☆24Oct 21, 2025Updated 9 months ago
- The snakemake analysis workflow for bioinformatics☆26Apr 21, 2026Updated 3 months ago
- Finding the causality in biological pathways☆14Jul 12, 2023Updated 3 years ago
- Indels are not ideal - quick test for interrupted ORFs in bacterial/microbial genomes☆15Jun 26, 2018Updated 8 years ago
- Oxford Nanopore HDF/Fast5 to CRAM conversion tool☆22Dec 30, 2019Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Interactive eQTL visualizations☆14Dec 12, 2022Updated 3 years ago
- A structural variant filtering and prioritization tool for long-read sequencing data☆45Updated this week
- ☆16Jun 22, 2022Updated 4 years ago
- 🧮 Extended Latent Dirichlet Allocation for Collaborative Filtering in Recommender Systems.☆42May 16, 2022Updated 4 years ago
- Pre-mAsking Long reads for Mobile Element inseRtion☆21Feb 9, 2026Updated 5 months ago
- hail-based pipelines for annotating variant callsets and exporting them to clickhouse☆23Jul 13, 2026Updated last week
- Data and scripts for Zika virus tutorial☆10Updated this week
- This is the development home of the Snakemake wrapper repository, see☆249Updated this week
- Tools to handle IMC data☆25Mar 31, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A variant caller for the GBA gene using WGS data☆23Jul 31, 2024Updated last year
- A viral haplotype reconstruction tool for long reads.☆16Jun 3, 2026Updated last month
- Copy number caller for long read data including SNV utilization☆69Mar 31, 2025Updated last year
- A dotplot application for DNA/RNA sequence☆11Nov 28, 2022Updated 3 years ago
- Front-end code for Serratus project website☆12Jul 2, 2024Updated 2 years ago
- Blang's software development kit☆25Nov 26, 2025Updated 7 months ago
- De Bruijn graph representation in low memory☆36Jul 6, 2024Updated 2 years ago