Alternatives and similar repositories for DeepCollisionalCrossSection:

Users that are interested in DeepCollisionalCrossSection are comparing it to the libraries listed below

• MannLabs / DeepCollisionalCrossSection
  ☆11Updated 4 years ago
• wfondrie / depthcharge
  A deep learning toolkit for mass spectrometry
  ☆70Updated 7 months ago
• statisticalbiotechnology / maracluster
  Matthew The's implementation of MaRaCluster
  ☆11Updated 2 years ago
• Proteobench / ProteoBench
  ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…
  ☆43Updated this week
• wilhelm-lab / koina
  Democratizing ML in proteomics
  ☆34Updated this week
• MannLabs / alphadia
  modular & open DIA search
  ☆64Updated this week
• MannLabs / alphamap
  An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.
  ☆81Updated 3 weeks ago
• theGreatHerrLebert / sagepy
  A python interface to the SAGE search engine for mass spectrometry proteomics
  ☆13Updated last week
• MannLabs / alphapeptdeep
  Deep learning framework for proteomics
  ☆116Updated this week
• michalsta / opentims
  Open-source C++ and Python module for opening binary timsTOF data files.
  ☆46Updated last week
• wilhelm-lab / PROSPECT
  Proteomics Mass Spectrometry Datasets for Machine Learning
  ☆13Updated 6 months ago
• ProteomicsML / ProteomicsML
  Community-curated tutorials and datasets for ML in proteomics
  ☆49Updated 3 months ago
• compomics / DeepLC
  DeepLC: Retention time prediction for (modified) peptides using Deep Learning.
  ☆59Updated 2 weeks ago
• thermofisherlsms / RawFileReader
  ☆54Updated 2 weeks ago
• MannLabs / alphatims
  An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…
  ☆84Updated this week
• thermofisherlsms / iapi
  Instrument Application Programming Interface
  ☆45Updated last month
• mafreitas / tdf2mzml
  ☆25Updated last year
• diogobor / Scout
  MS-cleavable search engine that enables interactomic analysis by identifying tandem mass spectra of cross-linked peptides.
  ☆19Updated 4 months ago
• wilhelm-lab / oktoberfest
  Rescoring and spectral library generation pipeline for proteomics.
  ☆39Updated this week
• Noble-Lab / casanovo
  De Novo Mass Spectrometry Peptide Sequencing with a Transformer Model
  ☆128Updated this week
• levitsky / pyteomics
  Pyteomics is a collection of lightweight and handy tools for Python that help to handle various sorts of proteomics data. Pyteomics provi…
  ☆124Updated last month
• MannLabs / directlfq
  Fast and accurate label-free quantification for small and very large numbers of proteomes
  ☆48Updated last week
• Nesvilab / MSFragger
  Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics
  ☆112Updated 8 months ago
• gtluu / timsconvert
  ☆36Updated 3 weeks ago
• pFindStudio / pGlyco3
  ☆17Updated 3 weeks ago
• compomics / ms2pip
  MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.
  ☆42Updated this week
• Nesvilab / diaTracer
  A diaPASEF spectrum-centric analysis tool
  ☆12Updated 8 months ago
• bzhanglab / deep_learning_in_proteomics
  A list of tools on proteomics using deep learning
  ☆91Updated 10 months ago
• orsburn / LCMSMethods
  The Git Account of LCMSMethods.org
  ☆11Updated 5 years ago
• pnnl / deimos
  ☆32Updated last week