Alternatives and similar repositories for MFP:

Users that are interested in MFP are comparing it to the libraries listed below

• Japrin / STARTRAC
  STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)
  ☆92Updated last year
• LocasaleLab / Single-Cell-Metabolic-Landscape
  Pipeline for exploring metebolic heterogeneity at single-cell resolution
  ☆73Updated 4 years ago
• arc85 / celltalker
  Inference of cell-cell communication from single-cell RNAseq data
  ☆47Updated last year
• SGI-LungCancer / SingleCell
  Code repository for single cell RNA-seq
  ☆33Updated 4 years ago
• FredHutch / Galeano-Nino-Bullman-Intratumoral-Microbiota_2022
  Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022
  ☆36Updated 11 months ago
• HaojiaWu / plot1cell
  A R package for advanced single cell data viz
  ☆62Updated last year
• Aleksobrad / single-cell-rcc-pipeline
  Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…
  ☆43Updated 3 years ago
• Coolgenome / iTALK
  ☆59Updated 5 years ago
• youqiongye / CRC_scRNAseq
  ☆44Updated 2 years ago
• ycl6 / StackedVlnPlot
  Create stacked violin plot
  ☆45Updated 2 years ago
• aerickso / SpatialInferCNV
  Clone Calling from Visium Spatial Transcriptomics of Cancer samples
  ☆60Updated 2 years ago
• YutingPKU / SingleCell-Multiomics
  ☆63Updated 2 years ago
• Dragonlongzhilin / RenalTumor
  Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma
  ☆76Updated 2 months ago
• cssmillie / ulcerative_colitis
  ☆60Updated 4 years ago
• naomihabiblab / BEYOND_DLPFC
  Cellular dynamics across aged human brains uncover a multicellular cascade leading to Alzheimer’s disease
  ☆48Updated last month
• haniffalab / scRNA-seq_analysis
  Single cell RNA-seq analysis bundle
  ☆34Updated 5 years ago
• carmonalab / scGate
  marker-based purification of cell types from single-cell RNA-seq datasets
  ☆100Updated 7 months ago
• rpolicastro / scProportionTest
  ☆61Updated last year
• JackieHanLab / SenCID
  Senescent Cell Identification
  ☆30Updated 10 months ago
• MSZaki / Aging-and-CR-rat-atlas
  Single cell RNA analysis about paper “Caloric restriction reprograms the single-cell transcriptional landscape of Rattus norvegicus aging…
  ☆28Updated 5 years ago
• matanhofree / crc-immune-hubs
  Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…
  ☆39Updated 3 years ago
• mathyslab7 / ROSMAP_snRNAseq_PFC
  ☆29Updated last year
• TheHumphreysLab / plot1cell
  ☆98Updated last year
• sridnona / cb_sniffer
  mutation(barcode) caller for 10x single cell data
  ☆44Updated 4 years ago
• RegnerM2015 / scENDO_scOVAR_2020
  This repository holds the scripts used to analyze the data presented in "A multi-omic single-cell landscape of human gynecologic malignan…
  ☆35Updated last year
• xmc811 / Scillus
  R Package for Single-Cell Dataset Processing and Visualization
  ☆61Updated 3 years ago
• liziyie / scDVA
  An R shiny based tool used for single cell RNA-seq data visualization and analysis.
  ☆32Updated 4 years ago
• ggjlab / scMCA
  Mouse cell atlas
  ☆60Updated 4 years ago
• data2intelligence / CytoSig
  ☆49Updated 3 months ago
• GreenleafLab / 10x-scATAC-2019
  Publication Page for Satpathy*, Granja* et al 2019
  ☆92Updated 4 years ago