BostonGene / MFPLinks
Mollecular Functional Portraits
☆42Updated last year
Alternatives and similar repositories for MFP
Users that are interested in MFP are comparing it to the libraries listed below
Sorting:
- Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".☆119Updated 10 months ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆107Updated 3 months ago
- ☆47Updated 3 years ago
- Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…☆51Updated 4 years ago
- Single-nuclei RNA-seq and ATAC-seq in Alzheimer's disease☆95Updated 4 years ago
- Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma☆79Updated 9 months ago
- Data processing and analysis related code associated with the study "A single-cell and spatially resolved atlas of human breast cancers".☆117Updated 10 months ago
- Codes used in pan-T cell analysis☆63Updated 2 years ago
- ☆46Updated 11 months ago
- The integration of single cell rank-based gene set enrichment analysis☆128Updated 3 weeks ago
- ☆61Updated 6 years ago
- Pipeline for exploring metebolic heterogeneity at single-cell resolution☆73Updated 5 years ago
- Clone Calling from Visium Spatial Transcriptomics of Cancer samples☆74Updated 2 years ago
- This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Pro…☆83Updated 9 months ago
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆107Updated 4 months ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 3 months ago
- Code repository for single cell RNA-seq☆36Updated 4 years ago
- Create stacked violin plot☆49Updated 3 years ago
- ☆68Updated last year
- ☆22Updated last year
- A R package for advanced single cell data viz☆68Updated last year
- R package for Pathway RespOnsive GENe activity inference☆106Updated 2 years ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated last year
- ☆31Updated 2 years ago
- Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…☆39Updated 3 years ago
- R Package for Single-Cell Dataset Processing and Visualization☆63Updated 4 years ago
- scGSVA: Perform GSVA for single cell RNA seq☆64Updated 8 months ago
- Tutorial of single-cell RNA-ATAC multiomic sequencing data analysis☆63Updated last year
- inferring cell-cell communication from scRNA-seq of ligand-receptor☆83Updated last year
- ☆17Updated 2 years ago