Toolkit for Modelling and Simulation of Gene Expressions and Metabolism
☆13Apr 1, 2026Updated 5 months ago
Alternatives and similar repositories for advancesyntoolkit
Users that are interested in advancesyntoolkit are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Core library and basic plug-ins for the Amyris Genotype Specification Language (GSL) compiler.☆24Apr 5, 2023Updated 3 years ago
- 🎨 Python library to plot multi-part genetic constructs☆26Apr 9, 2025Updated last year
- Predict DNA assembly clone validity rates - powered by Kappa☆10Jul 24, 2020Updated 6 years ago
- DNA overhang misannealing data for Python☆13May 15, 2025Updated last year
- 🏖️ The EGF Collection of Useful Bio Apps - Web demos of EGF software☆20Dec 10, 2022Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- 🤖 Python biolab automation library: parsers, report generators, picklist simulators, and more☆48May 13, 2026Updated 3 months ago
- Find common blocks and differences between DNA sequences☆46Nov 5, 2025Updated 9 months ago
- 💫 Computer-aided DNA assembly validation and identification from restriction digests.☆15May 29, 2025Updated last year
- Short overhangs design for DNA assembly☆15Jun 8, 2022Updated 4 years ago
- Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.☆32Apr 9, 2025Updated last year
- Batch domestication of genetic parts with Python☆16May 12, 2025Updated last year
- Draw genetic elements with HTML & CSS☆18May 6, 2026Updated 3 months ago
- 🎺 Plot DNA digestion band patterns with Python☆20May 12, 2025Updated last year
- Easily download genomes and build BLAST/Bowtie indexes in Python☆22Sep 30, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Repository of standardized biological experimental data and metadata☆16Jan 9, 2025Updated last year
- Web application enabling users and software to browse, upload, and share synthetic biology designs☆83Aug 19, 2026Updated 2 weeks ago
- CBMPy is a Python based platform for constraint based modelling and analysis.☆20May 26, 2026Updated 3 months ago
- A constraint-based method for prediction of metabolic engineering targets using ecModels of metabolism☆15Feb 12, 2025Updated last year
- A Universal Modeling Language for Metabolic Flux Analysis☆12Aug 10, 2026Updated 3 weeks ago
- TISIGNER: Unleash the power of synthetic biology☆30Aug 19, 2026Updated 2 weeks ago
- Generate identicons for DNA sequences with Python☆39May 8, 2025Updated last year
- Read DNA sequences from colourful Microsoft Word documents☆34May 12, 2025Updated last year
- Sequencing analysis pipeline☆16Dec 12, 2025Updated 8 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆66May 12, 2025Updated last year
- biostat final exam data and code☆10Jun 12, 2020Updated 6 years ago
- Based off of the official Rostlab & PredictProtein website installation, as of 2020-09-07, the produced Docker image from this repository…☆15Feb 13, 2023Updated 3 years ago
- Web based Registry platform for managing synthetic biological parts☆45May 16, 2024Updated 2 years ago
- A route planner for DNA assembly☆37May 12, 2025Updated last year
- Cello v2 is the continuation of the Cello genetic circuit design software.☆74May 16, 2022Updated 4 years ago
- An integrated visual environment for metabolic modeling methods such as FBA, FVA and Elementary Flux Modes, and advanced features such as…☆70Aug 15, 2026Updated 2 weeks ago
- Reproducible Research in Finse☆10Aug 5, 2020Updated 6 years ago
- This repository contains the positive-unlabeled learning-based enzyme promiscuity prediction model as described in the paper Deep learnin…☆18Feb 16, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆12Jan 27, 2025Updated last year
- Computational synthetic biology: Predicting DNA edits for bioengineering☆92Mar 27, 2017Updated 9 years ago
- various sources and scripts for genomic research software☆10May 11, 2015Updated 11 years ago
- SMETANA: a tool to analyse interactions in microbial communities☆74May 6, 2025Updated last year
- Predict All Links In Ecological Networks☆13Dec 9, 2021Updated 4 years ago
- FLYCOP (FLexible sYnthetic Consortium OPtimization)☆12Sep 24, 2018Updated 7 years ago
- ☆20Jun 20, 2022Updated 4 years ago