Toolkit for Modelling and Simulation of Gene Expressions and Metabolism
β13Apr 1, 2026Updated 3 months ago
Alternatives and similar repositories for advancesyntoolkit
Users that are interested in advancesyntoolkit are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Core library and basic plug-ins for the Amyris Genotype Specification Language (GSL) compiler.β24Apr 5, 2023Updated 3 years ago
- π¨ Python library to plot multi-part genetic constructsβ26Apr 9, 2025Updated last year
- Predict DNA assembly clone validity rates - powered by Kappaβ10Jul 24, 2020Updated 6 years ago
- DNA overhang misannealing data for Pythonβ13May 15, 2025Updated last year
- ποΈ The EGF Collection of Useful Bio Apps - Web demos of EGF softwareβ20Dec 10, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean β’ AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- π€ Python biolab automation library: parsers, report generators, picklist simulators, and moreβ48May 13, 2026Updated 2 months ago
- Find common blocks and differences between DNA sequencesβ46Nov 5, 2025Updated 8 months ago
- π« Computer-aided DNA assembly validation and identification from restriction digests.β15May 29, 2025Updated last year
- Short overhangs design for DNA assemblyβ15Jun 8, 2022Updated 4 years ago
- Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.β32Apr 9, 2025Updated last year
- Batch domestication of genetic parts with Pythonβ16May 12, 2025Updated last year
- Draw genetic elements with HTML & CSSβ17May 6, 2026Updated 2 months ago
- πΊ Plot DNA digestion band patterns with Pythonβ20May 12, 2025Updated last year
- Easily download genomes and build BLAST/Bowtie indexes in Pythonβ22Sep 30, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Repository of standardized biological experimental data and metadataβ16Jan 9, 2025Updated last year
- Web application enabling users and software to browse, upload, and share synthetic biology designsβ83Updated this week
- CBMPy is a Python based platform for constraint based modelling and analysis.β20May 26, 2026Updated last month
- A constraint-based method for prediction of metabolic engineering targets using ecModels of metabolismβ15Feb 12, 2025Updated last year
- A Universal Modeling Language for Metabolic Flux Analysisβ12Mar 6, 2025Updated last year
- TISIGNER: Unleash the power of synthetic biologyβ30May 24, 2025Updated last year
- Generate identicons for DNA sequences with Pythonβ39May 8, 2025Updated last year
- Read DNA sequences from colourful Microsoft Word documentsβ34May 12, 2025Updated last year
- Sequencing analysis pipelineβ16Dec 12, 2025Updated 7 months ago
- AI Agents on DigitalOcean Gradient AI Platform β’ AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assembliesβ66May 12, 2025Updated last year
- biostat final exam data and codeβ10Jun 12, 2020Updated 6 years ago
- Based off of the official Rostlab & PredictProtein website installation, as of 2020-09-07, the produced Docker image from this repositoryβ¦β15Feb 13, 2023Updated 3 years ago
- Web based Registry platform for managing synthetic biological partsβ45May 16, 2024Updated 2 years ago
- A route planner for DNA assemblyβ37May 12, 2025Updated last year
- Cello v2 is the continuation of the Cello genetic circuit design software.β74May 16, 2022Updated 4 years ago
- An integrated visual environment for metabolic modeling methods such as FBA, FVA and Elementary Flux Modes, and advanced features such asβ¦β69Updated this week
- Reproducible Research in Finseβ10Aug 5, 2020Updated 5 years ago
- This repository contains the positive-unlabeled learning-based enzyme promiscuity prediction model as described in the paper Deep learninβ¦β18Feb 16, 2025Updated last year
- Proton VPN Special Offer - Get 70% off β’ AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- β12Jan 27, 2025Updated last year
- Computational synthetic biology: Predicting DNA edits for bioengineeringβ92Mar 27, 2017Updated 9 years ago
- various sources and scripts for genomic research softwareβ10May 11, 2015Updated 11 years ago
- SMETANA: a tool to analyse interactions in microbial communitiesβ72May 6, 2025Updated last year
- Predict All Links In Ecological Networksβ13Dec 9, 2021Updated 4 years ago
- FLYCOP (FLexible sYnthetic Consortium OPtimization)β12Sep 24, 2018Updated 7 years ago
- β20Jun 20, 2022Updated 4 years ago