bioforensics / MicroHapDBLinks
Portable database of microhaplotype marker and allele frequency data
☆10Updated last month
Alternatives and similar repositories for MicroHapDB
Users that are interested in MicroHapDB are comparing it to the libraries listed below
Sorting:
- Multi-nucleotide variants (MNVs) in gnomAD 2.1☆12Updated 3 years ago
- An efficient Variant-Caller to highlight low allele-frequency tumor mutations in a clinical practice☆11Updated 2 years ago
- 180+ Java applications for analyzing next generation sequencing data from ChIPSeq, RNASeq, BisSeq, DNASeq, variant annotation/ filtering,…☆18Updated last week
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆35Updated last year
- A JBrowse plugin to view multiple alignment format (MAF) files☆26Updated last year
- Structural variant VCF annotation, duplicate removal and comparison☆33Updated 6 months ago
- Splice junction analysis and filtering from BAM files☆40Updated 3 years ago
- ☆16Updated last month
- Pipeline for identifying viral integration and fusion mRNA reads from NGS data. Manuscript is currently in preparation.☆28Updated 4 years ago
- for visual evaluation of read support for structural variation☆54Updated last year
- fastx-utils using klib☆19Updated 5 years ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆49Updated this week
- CNV Rapid Aberration Detection And Reporting☆12Updated 4 years ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 6 months ago
- A python package and a set of shell commands to handle GTF files☆49Updated last year
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆23Updated 9 years ago
- A Quality Control filter and parser for NCBI BLAST XML results.☆17Updated 5 years ago
- Interactive multiscale visualization for structural variation in human genomes☆70Updated last week
- ☆16Updated 6 years ago
- ☆28Updated 2 years ago
- Debarcer: A package for De-Barcoding and Error Correction of sequencing data containing molecular barcodes☆15Updated 4 years ago
- pathway based data integration and visualization☆41Updated 5 months ago
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.☆39Updated 2 years ago
- Accurate Typing of Human Leukocyte Antigen (HLA) by Oxford Nanopore Sequencing☆16Updated 7 years ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- ☆19Updated this week
- ☆21Updated last year
- Useful tools for working with Salmon output☆38Updated 5 years ago
- IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split …☆16Updated 2 years ago
- R API for browsing, analyzing, and manipulating reference-aligned genome graphs in a GenomicRanges framework☆41Updated last week