mozack / abra2Links
ABRA2
☆92Updated 2 years ago
Alternatives and similar repositories for abra2
Users that are interested in abra2 are comparing it to the libraries listed below
Sorting:
- Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows.☆98Updated 3 years ago
- VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.☆97Updated last year
- This repository contains information about latest release from Genome in a Bottle project☆74Updated 5 years ago
- A tool for profiling long STRs from short reads☆97Updated 4 years ago
- Bayesian genotyper for structural variants☆134Updated 4 years ago
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆102Updated 4 years ago
- Relevant papers for CNV and SV approaches☆94Updated 7 months ago
- SV detection from paired end reads mapping☆117Updated 5 years ago
- VarDict☆198Updated last year
- Visualization and annotation of CNVs from population-scale whole-genome sequencing data☆71Updated 7 years ago
- ☆122Updated 7 months ago
- BAM Statistics, Feature Counting and Annotation☆150Updated 4 months ago
- Variant calling and somatic mutation/CNV detection for next-generation sequencing data☆160Updated 2 years ago
- Read visualizer for structural variants☆84Updated 6 years ago
- Script to automatically create and run IGV snapshot batchscripts☆141Updated 2 years ago
- WisecondorX — An evolved WISECONDOR☆98Updated 9 months ago
- A tool set for short variant discovery in genetic sequence data.☆197Updated 4 years ago
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆72Updated 9 months ago
- Tools for processing and analyzing structural variants.☆152Updated 3 years ago
- Software program for checking sample matching for NGS data☆132Updated last year
- NEAT read simulation tools☆98Updated 3 years ago
- Filtering and profiling of next-generational sequencing data using region-specific rules☆77Updated last year
- ☆82Updated 6 years ago
- A tool to identify, orient, trim and rescue full length cDNA reads☆82Updated 2 years ago
- phasing and Allele Specific Expression from RNA-seq☆115Updated 11 months ago
- Control-FREEC: Copy number and genotype annotation in whole genome and whole exome sequencing data☆161Updated 10 months ago
- don't get DUP'ed or DEL'ed by your putative SVs.☆106Updated 4 years ago
- A suite of tools for detecting expansions of short tandem repeats☆82Updated last year
- Structural variation and indel detection by local assembly☆246Updated last week
- Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics☆113Updated 2 weeks ago