Bicycle: Intervention-Based Causal Discovery with Cycles
☆39Jun 3, 2025Updated last year
Alternatives and similar repositories for bicycle
Users that are interested in bicycle are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆51May 8, 2026Updated 5 months ago
- Cross-modality matching and prediction with labeled Gromov-Wasserstein Optimal Transport.☆21Oct 10, 2024Updated last year
- Diffusion model for gene regulatory network inference.☆30Sep 23, 2026Updated 2 weeks ago
- Source code and data for "Causal reasoning over knowledge graphs leveraging drug-perturbed and disease-specific transcriptomic signatures…☆19Jul 3, 2024Updated 2 years ago
- Multi-omics factor analysis v2☆70Sep 4, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- G Square Conditional Independence Test☆11Mar 7, 2017Updated 9 years ago
- Pareto Task Inference in Python☆23Updated this week
- This is the code for the paper Jacobian-based Causal Discovery with Nonlinear ICA, demonstrating how identifiable representations (partic…☆22Sep 5, 2024Updated 2 years ago
- A simulator for single-cell expression data guided by gene regulatory networks☆85May 8, 2024Updated 2 years ago
- COMUNET: a tool to explore and visualize intercellular communication☆13Apr 15, 2020Updated 6 years ago
- Finding gene expression states in scRNA-seq data☆58Mar 22, 2024Updated 2 years ago
- This is a repository of the scLinaX R package developed in the Tomofuji et al (Quantification of escape from X chromosome inactivation wi…☆12Sep 12, 2025Updated last year
- Fast motif matching in R☆49Jan 24, 2024Updated 2 years ago
- Analysis of JOSS data and statistics☆13Sep 23, 2026Updated 2 weeks ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆10Feb 27, 2026Updated 7 months ago
- Pretty, simple, optionally interactive plots for bioinformatics analysis pipelines☆14Mar 1, 2023Updated 3 years ago
- A pipeline for processing Molecular Cartography data from Resolve Bioscience (combinatorial FISH)☆14Updated this week
- ☆10Jun 9, 2026Updated 4 months ago
- Python playground for cell-type-specific biology☆14Aug 25, 2026Updated last month
- Sequential Optimal Experimental Design of Perturbation Screens Guided by Multimodal Priors☆48May 25, 2024Updated 2 years ago
- A simple script to add pdf-files to Zotero via CLI☆12May 17, 2020Updated 6 years ago
- R functions for very fast eigenvector calculation☆11Jan 18, 2023Updated 3 years ago
- Materials accompanying the upstrap paper☆12Oct 19, 2020Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Base for the Viral Genomics and Bioinformatics Repository☆17Jul 5, 2024Updated 2 years ago
- A script that can help you find JOSS reviewers☆13Jul 7, 2020Updated 6 years ago
- Bam to Pandas DataFrame, quickly☆13May 10, 2025Updated last year
- A GUI to utilize CLI and other tools to interact/sync with your Zotero library.☆15Jun 14, 2026Updated 3 months ago
- Quantum Accelerated Genome Sequencing☆12Sep 7, 2021Updated 5 years ago
- Feature selection for preserving biological trajectories in single-cell data☆21Jun 24, 2026Updated 3 months ago
- Simple probability sequencer plugin for Mac (VST and AU)☆10Oct 9, 2022Updated 4 years ago
- ☆11Aug 12, 2026Updated last month
- Simulate GWAS data from an arbitrary DAG☆14Sep 15, 2026Updated 3 weeks ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Example data for R/qtl2☆13May 29, 2026Updated 4 months ago
- Test genes for Spatial Variation☆15Dec 20, 2024Updated last year
- (Conditional) Independence testing & Markov blanket feature selection using k-NN mutual information and conditional mutual information es…☆30Jun 16, 2020Updated 6 years ago
- Trajectory Inference Based on SNP information.☆24Jun 19, 2024Updated 2 years ago
- Orthogonal Quantile Regression☆11Oct 21, 2021Updated 4 years ago
- Higher Order SVD implementation in PyTorch☆13Nov 14, 2022Updated 3 years ago
- Training material for the GWAS Catalog REST API workshop☆13Aug 13, 2026Updated last month