PATRIC3 / mauve-viewerLinks
A Whole Genome Alignment Visualization Tool for the Web
☆44Updated 2 years ago
Alternatives and similar repositories for mauve-viewer
Users that are interested in mauve-viewer are comparing it to the libraries listed below
Sorting:
- A tool for generating bacterial genomes from metagenomes with nanopore long read sequencing☆68Updated 4 years ago
- hifiasm_meta - de novo metagenome assembler, based on hifiasm, a haplotype-resolved de novo assembler for PacBio Hifi reads.☆69Updated last month
- Visualize whole genome alignments as linear maps☆74Updated 5 months ago
- tools for assessing the accuracy of genome assemblies☆35Updated last year
- A scalable bacterial genome assembly, annotation and analysis pipeline☆74Updated 2 years ago
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- Synteny Imager☆65Updated 3 weeks ago
- A genome alignment and visualization system☆32Updated 5 years ago
- Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio reads☆64Updated last year
- Fast k-mer based tool for multi locus sequence typing (MLST)☆45Updated 5 years ago
- visualising sequence similarity with Circos☆41Updated 6 years ago
- Microbiome classification pipeline☆65Updated 7 months ago
- k-mer learning materials☆82Updated 10 months ago
- A versatile toolkit for k-mers with taxonomic information☆81Updated 4 months ago
- Protein hint generation pipeline for gene finding in eukaryotic genomes☆60Updated 2 years ago
- This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33/4/475/2623362, by Roye…☆58Updated 4 years ago
- FastOMA is a scalable software package to infer orthology relationship.☆86Updated 2 weeks ago
- GTDB taxonomy taxdump files with trackable TaxIds☆57Updated 8 months ago
- nanodisco: a toolbox for discovering and exploiting multiple types of DNA methylation from individual bacteria and microbiomes using nano…☆72Updated 3 years ago
- 🔗Genome assembly scaffolder using minimizer graphs☆85Updated last year
- Full-length de novo viral haplotype reconstruction from noisy long reads☆21Updated 2 years ago
- a collection of scripts for organising bacterial genomes by species☆81Updated 3 years ago
- Pan-genomic sequence analysis☆46Updated 3 years ago
- Pangenome analysis of eukaryotes.☆20Updated 5 years ago
- Automatically exported from code.google.com/p/prottest3☆38Updated 7 years ago
- Improve the quality of a denovo assembly by scaffolding and gap filling☆57Updated 5 years ago
- A surveillance-oriented tool to strengthen the linkage between pathogen genetic clusters and epidemiological data☆47Updated 2 months ago
- High throughput protein function annotation with Human Readable Description (HRDs) and Gene Ontology (GO) Terms.☆67Updated 2 years ago
- STAG: Species Tree from All Genes☆34Updated 7 years ago
- A nextflow pipeline for decontamination of short reads, long reads and contigs☆55Updated 6 months ago