OHDSI / ApolloLinks
[Under development] Assessment of Pre-trained Observational Large Language-models in OHDSI (APOLLO)
☆14Updated 11 months ago
Alternatives and similar repositories for Apollo
Users that are interested in Apollo are comparing it to the libraries listed below
Sorting:
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 6 months ago
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆36Updated last year
- An R package for performing various cohort diagnostics.☆45Updated last week
- ETL Tool for converting datasets to OMOP CDM☆32Updated 2 years ago
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆24Updated 3 years ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆61Updated 2 months ago
- ☆25Updated 4 months ago
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆81Updated last month
- Training materials for Vocabulary & CDM Tutorial.☆21Updated 5 years ago
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries!☆43Updated last week
- An R package that facilitates access to a variety of OMOP CDM sample data sets.☆44Updated 2 weeks ago
- Oncology Working Group Repository☆56Updated last week
- [Under development] A dbt ETL project to convert a Synthea synthetic data set into the OMOP CDM☆29Updated this week
- An R package for generating features (covariates) for a cohort using data in the Common Data Model.☆63Updated this week
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆32Updated last year
- ☆12Updated 3 weeks ago
- CDM Builder leveraging AWS Lambda☆16Updated this week
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆67Updated 10 months ago
- Course materials for OHDSI ETL tutorial☆48Updated 7 months ago
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆78Updated last week
- A package supporting the conversion from Synthea CSV to OMOP CDM☆110Updated 3 months ago
- A repository to store, organize and maintain the content of the OHDSI Phenotype library. OHDSI Forum post https://forums.ohdsi.org/t/ohds…☆47Updated 2 months ago
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆63Updated last week
- Data Ingestion and Harmonization☆44Updated last month
- Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.☆96Updated last year
- This repository is for developing study packages for OHDSI studies. Once completed, they can be moved to the StudyProtocols repository.☆32Updated 3 weeks ago
- ☆15Updated 6 months ago
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆88Updated last year
- An R package for evaluating phenotype algorithms.☆17Updated 7 months ago
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆139Updated 2 weeks ago