OHDSI / Apollo
[Under development] Assessment of Pre-trained Observational Large Language-models in OHDSI (APOLLO)
☆14Updated 9 months ago
Alternatives and similar repositories for Apollo:
Users that are interested in Apollo are comparing it to the libraries listed below
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆34Updated last year
- Oncology Working Group Repository☆56Updated this week
- ☆25Updated last month
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 4 months ago
- An R package for performing various cohort diagnostics.☆43Updated this week
- CDM Builder leveraging AWS Lambda☆16Updated last week
- A package supporting the conversion from Synthea CSV to OMOP CDM☆106Updated last month
- Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.☆93Updated 9 months ago
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries!☆43Updated this week
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆76Updated this week
- Training materials for Vocabulary & CDM Tutorial.☆21Updated 5 years ago
- ETL Tool for converting datasets to OMOP CDM☆31Updated 2 years ago
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆23Updated 3 years ago
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆62Updated last year
- Data Ingestion and Harmonization☆43Updated 2 years ago
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆65Updated 7 months ago
- An R package that facilitates access to a variety of OMOP CDM sample data sets.☆43Updated 6 months ago
- An R package for evaluating phenotype algorithms.☆17Updated 5 months ago
- An R package for generating features (covariates) for a cohort using data in the Common Data Model.☆62Updated last week
- [Under development] A dbt ETL project to convert a Synthea synthetic data set into the OMOP CDM☆25Updated last month
- ☆14Updated 4 months ago
- A repository to store, organize and maintain the content of the OHDSI Phenotype library. OHDSI Forum post https://forums.ohdsi.org/t/ohds…☆43Updated 5 months ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆60Updated 2 weeks ago
- This repository is for developing study packages for OHDSI studies. Once completed, they can be moved to the StudyProtocols repository.☆32Updated 3 years ago
- ☆27Updated 6 years ago
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆80Updated 2 weeks ago
- Course materials for OHDSI ETL tutorial☆45Updated 5 months ago
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆86Updated last year
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆32Updated last year
- Mapping the MIMIC-III database to the OMOP schema☆132Updated last year