OHDSI / Usagi
Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.
☆93Updated 9 months ago
Alternatives and similar repositories for Usagi:
Users that are interested in Usagi are comparing it to the libraries listed below
- Course materials for OHDSI ETL tutorial☆45Updated 4 months ago
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 4 months ago
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆135Updated 2 weeks ago
- A package supporting the conversion from Synthea CSV to OMOP CDM☆105Updated 3 weeks ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆60Updated last week
- ETL-CDMBuilder is a repo containing a .NET Core application to perform ETL to OMOP CDM for multiple databases☆50Updated last year
- Oncology Working Group Repository☆56Updated last month
- OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications☆135Updated this week
- Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.☆233Updated this week
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆79Updated last week
- The Book of OHDSI repository☆114Updated 6 months ago
- Workproducts to ETL CMS datasets into OMOP Common Data Model☆100Updated 3 years ago
- This repository is for developing study packages for OHDSI studies. Once completed, they can be moved to the StudyProtocols repository.☆32Updated 3 years ago
- Leaf Clinical Data Explorer☆91Updated 4 months ago
- A tool to help improve data quality standards in observational data science.☆156Updated 2 months ago
- The PCORnet Common Data Model (CDM) Forum guidance repository contains materials intended to support implementation efforts by data partn…☆30Updated 4 years ago
- Repository of OHDSI Collaborative Research Protocols☆38Updated last year
- ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data☆279Updated this week
- ☆25Updated last month
- Data Ingestion and Harmonization☆43Updated 2 years ago
- WhiteRabbit is a small application that can be used to analyse the structure and contents of a database as preparation for designing an E…☆186Updated this week
- A repository to store, organize and maintain the content of the OHDSI Phenotype library. OHDSI Forum post https://forums.ohdsi.org/t/ohds…☆42Updated 5 months ago
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆62Updated last year
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆65Updated 7 months ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆32Updated last year
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆34Updated last year
- An R package for generating features (covariates) for a cohort using data in the Common Data Model.☆62Updated 2 weeks ago
- Training materials for Vocabulary & CDM Tutorial.☆21Updated 5 years ago
- Mapping the MIMIC-III database to the OMOP schema☆132Updated last year
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆60Updated 2 years ago