The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream
☆66Jul 10, 2025Updated 10 months ago
Alternatives and similar repositories for Phenotype_Data_Acquisition
Users that are interested in Phenotype_Data_Acquisition are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Data Ingestion and Harmonization☆46Mar 17, 2026Updated 2 months ago
- ACT COVID Ontology☆15Sep 30, 2021Updated 4 years ago
- Master Documentation Repository for OHNLP Projects Related to Coronavirus Disease 2019☆21Dec 8, 2022Updated 3 years ago
- ☆25Feb 3, 2025Updated last year
- The PCORnet Common Data Model (CDM) Forum guidance repository contains materials intended to support implementation efforts by data partn…☆32Jun 1, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Leaf Clinical Data Explorer☆102May 6, 2026Updated 3 weeks ago
- This is the repository for the open source code of the distributed data network platform PopMedNet☆12Nov 5, 2024Updated last year
- Scripts used to produce the analysis in our paper on computable phenotypes for long-COVID☆18Sep 17, 2025Updated 8 months ago
- Characterizing Health Associated Risks, and Your Baseline Disease In SARS-COV-2 (CHARYBDIS) - a study to describe the baseline demographi…☆19Jul 28, 2021Updated 4 years ago
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆73Apr 10, 2026Updated last month
- Clinical Natural Language Processing using spaCy, scispacy, and medspacy☆102Apr 24, 2024Updated 2 years ago
- Open source clinical text de-identification☆156Aug 20, 2024Updated last year
- ☆13Feb 5, 2026Updated 3 months ago
- The OHDSI repository to provide comprehensive evidence for the covid-19☆13Jan 13, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Clinical Research Informatics☆13Aug 23, 2023Updated 2 years ago
- Repository for the GA4GH phenopacket schema☆98May 20, 2026Updated last week
- Standalone shiny server container for viewing CellChat object☆13Feb 18, 2021Updated 5 years ago
- Builds a knowledge graph from the [COVID-19 Open Research Dataset (CORD-19)](https://pages.semanticscholar.org/coronavirus-research) data…☆16Mar 27, 2020Updated 6 years ago
- Pilot model and converter for integration of radiology data into OMOP-CDM☆23Nov 1, 2019Updated 6 years ago
- This is a repository for annotation data for the THYME Project, a clinical natural language processing project dedicated to extracting us…☆36May 21, 2025Updated last year
- Resources for the KG course at IDS, Maastricht University☆13Feb 25, 2025Updated last year
- Back end for producing indicators and loading them into the COVIDcast API.☆12Apr 2, 2026Updated last month
- ☆12Nov 14, 2025Updated 6 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.☆216May 6, 2026Updated 3 weeks ago
- Main OMOPonFHIR Settings☆47Feb 11, 2022Updated 4 years ago
- ☆14Feb 10, 2026Updated 3 months ago
- ETUDE (Evaluation Tool for Unstructured Data and Extractions) is a Python-based tool that provides consistent evaluation options across a…☆12Jul 22, 2022Updated 3 years ago
- This is an R package that implements a library of standard queries that run against the OMOP-CDM.☆18Jun 7, 2024Updated last year
- ☆16Apr 19, 2018Updated 8 years ago
- Clinical Language Annotation Modeling and Processing toolkit☆17Oct 10, 2016Updated 9 years ago
- Locally-Scaled Diffusion Maps, DM-d-MD☆12May 12, 2016Updated 10 years ago
- Source code for the i2b2 Web Client☆30May 1, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆17Apr 22, 2026Updated last month
- PCORnet Data Curation Query Package☆12Apr 3, 2026Updated last month
- ☆16Aug 28, 2020Updated 5 years ago
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆147Dec 2, 2025Updated 5 months ago
- This is an R package and Java library for rendering parameterized SQL, and translating it to different SQL dialects.☆87Mar 25, 2026Updated 2 months ago
- Documentation and tutorials on using AWS for biomedical research☆18Mar 31, 2026Updated last month
- Virtual Machine containing SynPUF data in OMOP CDM, a RDBS including query client, WebAPI, ATLAS, R and Python.☆58Mar 7, 2021Updated 5 years ago