Alternatives and similar repositories for Phenotype_Data_Acquisition

Users that are interested in Phenotype_Data_Acquisition are comparing it to the libraries listed below

• OHDSI / PhenotypeLibrary
  A repository to store, organize and maintain the content of the OHDSI Phenotype library. OHDSI Forum post https://forums.ohdsi.org/t/ohds…
  ☆49Updated 2 weeks ago
• callahantiff / OMOP2OBO
  OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies
  ☆91Updated 2 years ago
• OHDSI / PatientLevelPrediction
  An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.
  ☆210Updated last week
• spiros / chronological-map-phenotypes
  Machine-readable version of electronic health record phenotypes for Kuan V. and Denaxas S. et al.
  ☆49Updated last year
• National-Clinical-Cohort-Collaborative / Data-Ingestion-and-Harmonization
  Data Ingestion and Harmonization
  ☆46Updated last month
• OHNLP / N3C-NLP-Documentation
  Master Documentation Repository for OHNLP Projects Related to Coronavirus Disease 2019
  ☆21Updated 2 years ago
• OHDSI / StudyProtocolSandbox
  This repository is for developing study packages for OHDSI studies. Once completed, they can be moved to the StudyProtocols repository.
  ☆33Updated 4 months ago
• OHDSI / PheValuator
  An R package for evaluating phenotype algorithms.
  ☆21Updated 2 months ago
• OHDSI / OncologyWG
  Oncology Working Group Repository
  ☆57Updated last month
• OHDSI / FeatureExtraction
  An R package for generating features (covariates) for a cohort using data in the Common Data Model.
  ☆70Updated last month
• OHDSI / Athena
  Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM
  ☆71Updated 2 months ago
• OHDSI / Aphrodite
  [in development]
  ☆38Updated 4 years ago
• BenGlicksberg / PatientExploreR
  Dynamic visualization of Electronic Health Record data in the OMOP framework
  ☆29Updated 4 years ago
• OHDSI / CohortDiagnostics
  An R package for performing various cohort diagnostics.
  ☆47Updated last month
• OHDSI / Criteria2Query
  [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…
  ☆70Updated last month
• OHDSI / Achilles
  Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…
  ☆142Updated last week
• NCTraCSIDSci / camp-fhir
  ☆25Updated 8 months ago
• spiros / hdr-caliber-phenotype-library
  HDR UK National Phenotype Library
  ☆22Updated 2 years ago
• OHDSI / Themis
  Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …
  ☆28Updated 2 months ago
• shyamvis / ACT-COVID-Ontology
  ACT COVID Ontology
  ☆15Updated 4 years ago
• MIT-LCP / mimic-omop
  Mapping the MIMIC-III database to the OMOP schema
  ☆143Updated last year
• ltscomputingllc / faersdbstats
  Generate safety signal statistics from FDA FAERS data
  ☆51Updated last year
• BenGlicksberg / ROMOP
  R package to easily interface with OMOP-formatted EHR data.
  ☆36Updated 5 years ago
• celehs / PheCAP
  https://celehs.github.io/PheCAP/
  ☆22Updated 4 years ago
• uwrit / leaf
  Leaf Clinical Data Explorer
  ☆97Updated 6 months ago
• ohdsi-studies / LegendT2dm
  ☆12Updated 5 months ago
• OHDSI / Tutorial-CDM
  Training materials for Vocabulary & CDM Tutorial.
  ☆22Updated 6 years ago
• hms-dbmi / EHRtemporalVariability
  R package for delineating temporal dataset shifts in Eletronic Health Records
  ☆17Updated last year
• clinicalml / omop-learn
  Python package for machine learning for healthcare using a OMOP common data model
  ☆110Updated 2 years ago
• OHDSI / Radiology-CDM
  Pilot model and converter for integration of radiology data into OMOP-CDM
  ☆23Updated 5 years ago