Oncology Working Group Repository
☆60Dec 31, 2025Updated 2 months ago
Alternatives and similar repositories for OncologyWG
Users that are interested in OncologyWG are comparing it to the libraries listed below
Sorting:
- Repository for development of the genomic module of the CDM.☆25Jun 14, 2019Updated 6 years ago
- Tool to identify concept in the OMOP Genomic vocabulary from VCF and other files as well as HGVS notations☆15May 6, 2024Updated last year
- This is an R package that implements a library of standard queries that run against the OMOP-CDM.☆18Jun 7, 2024Updated last year
- Health Analytics Data-to-Evidence Suite (HADES): A collection of R packages for performing analytics against the Common Data Model.☆27Updated this week
- Cohort definition Application Programming in R☆20Feb 18, 2026Updated 2 weeks ago
- Shiny apps in this repository will be automatically deployed to the OHDSI Shiny server.☆27Feb 18, 2025Updated last year
- Public release of the DeepPhe analytic software☆30Nov 26, 2025Updated 3 months ago
- ☆17Sep 14, 2018Updated 7 years ago
- Expert-Curated Oncology Reports to Advance Language Model Inference☆33Apr 17, 2024Updated last year
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆88Jan 5, 2026Updated 2 months ago
- An R package for generating features (covariates) for a cohort using data in the Common Data Model.☆71Updated this week
- This Java library provides support for the NAACCR XML format.☆16Feb 26, 2026Updated last week
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆24Jun 25, 2021Updated 4 years ago
- An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.☆214Updated this week
- A repository to store, organize and maintain the content of the OHDSI Phenotype library. OHDSI Forum post https://forums.ohdsi.org/t/ohds…☆53Oct 13, 2025Updated 4 months ago
- An intuitive platform for deploying the latest discoveries in healthcare AI to everybody's phones. Powered by PyTorch!☆10Aug 25, 2020Updated 5 years ago
- Runs CQL phenotype definitions against an OMOP repository☆12Apr 14, 2023Updated 2 years ago
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆145Dec 2, 2025Updated 3 months ago
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Aug 27, 2025Updated 6 months ago
- ☆29Jul 15, 2023Updated 2 years ago
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries, MCP server and FHIR import.☆58Feb 26, 2026Updated last week
- Dynamic visualization of Electronic Health Record data in the OMOP framework☆29May 28, 2021Updated 4 years ago
- A Research Exploration System☆17Mar 2, 2026Updated last week
- SQLAlchemy models for OHDSI OMOP Common Data Model☆13Feb 23, 2026Updated 2 weeks ago
- ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data☆307Feb 5, 2026Updated last month
- Parkar and Kim et al.'s paper on Can LLMs Select Important Instructions to Annotate?"☆13Jul 4, 2024Updated last year
- Hephaestus - ETL and ML tools for OHDSI - OMOP CDM☆13Sep 18, 2025Updated 5 months ago
- Definition and DDLs for the OMOP Common Data Model (CDM)☆1,022Nov 5, 2025Updated 4 months ago
- [Under development] Assessment of Pre-trained Observational Large Language-models in OHDSI (APOLLO)☆14Jun 18, 2024Updated last year
- Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.☆262Updated this week
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆72Aug 28, 2025Updated 6 months ago
- Microservice for safe sharing and easy access to medical images☆18Apr 5, 2019Updated 6 years ago
- The i2b2 data repository☆46Updated this week
- Repository of OHDSI Collaborative Research Protocols☆40Apr 25, 2023Updated 2 years ago
- Python package for machine learning for healthcare using a OMOP common data model☆111Jun 17, 2023Updated 2 years ago
- Secure and federated genome-wide association studies☆17Mar 19, 2025Updated 11 months ago
- Verifying Facts in LLM-Generated Clinical Text with Electronic Health Records☆27Jan 2, 2026Updated 2 months ago
- Characterizing Health Associated Risks, and Your Baseline Disease In SARS-COV-2 (CHARYBDIS) - a study to describe the baseline demographi…☆19Jul 28, 2021Updated 4 years ago
- Outcomes Insights' Data Model for Clinical Research☆19Feb 26, 2026Updated last week