OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies
☆96Oct 3, 2023Updated 2 years ago
Alternatives and similar repositories for OMOP2OBO
Users that are interested in OMOP2OBO are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- OHDSI Ananke - A Tool for Mapping Between OHDSI Concept Identifiers to Unified Medical Language System (UMLS) identifiers☆15Sep 28, 2020Updated 5 years ago
- A python library for calculating semantic similarity between patients in N3C☆14Oct 5, 2022Updated 3 years ago
- Network Embedding All the Things☆18Oct 4, 2022Updated 3 years ago
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆201May 3, 2024Updated last year
- Integrated OBO ontology store☆48Feb 13, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Transform the OMOP model to graph model☆27Dec 13, 2024Updated last year
- ☆26Aug 7, 2019Updated 6 years ago
- Tools for working with KGCL☆20Nov 19, 2024Updated last year
- CRDC-H model in LinkML, developed by the Center for Cancer Data Harmonization (CCDH)☆18Jan 7, 2022Updated 4 years ago
- FHIR Ontop OMOP Implementation☆21May 8, 2024Updated last year
- Repository for development of the genomic module of the CDM.☆25Jun 14, 2019Updated 6 years ago
- Repository for the GA4GH phenopacket schema☆98Mar 30, 2026Updated 2 weeks ago
- Computational LOINC in OWL.☆18Oct 8, 2025Updated 6 months ago
- Ontology Access Kit: A python library and command line application for working with ontologies☆165Updated this week
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Java library to map LOINC-encoded test results to Human Phenotype Ontology☆34Jan 16, 2024Updated 2 years ago
- Simple Standard for Sharing Ontology Mappings☆194Updated this week
- Customizable translation of OBO graphs to dot for visualization using graphviz and other tools☆26Feb 21, 2025Updated last year
- phenol: Phenotype ontology library☆25Dec 5, 2025Updated 4 months ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆36Jan 2, 2024Updated 2 years ago
- Medical action ontology☆65Jan 15, 2026Updated 3 months ago
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆24Jun 25, 2021Updated 4 years ago
- Data Ingestion and Harmonization☆46Mar 17, 2026Updated last month
- Python toolkit for SSSOM mapping format☆61Apr 8, 2026Updated last week
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- 🍇 Embiggen is the Python Graph Representation learning, Prediction and Evaluation submodule of the GRAPE library.☆44Jan 8, 2026Updated 3 months ago
- An instance of KG Hub to produce a knowledge graph for COVID-19 response.☆84Aug 3, 2023Updated 2 years ago
- An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)☆47Apr 6, 2026Updated last week
- Transforming SemRep Predications into an Open Biomedical Linked Data Resource☆11Jan 26, 2018Updated 8 years ago
- The Potential Drug-drug Interaction and Potential Drug-drug Interaction Evidence Ontology (DIDEO)☆15Oct 25, 2023Updated 2 years ago
- Bayesian OWL ontology merging☆35Jun 4, 2025Updated 10 months ago
- ☆25Feb 3, 2025Updated last year
- ☆13Updated this week
- 🍇 Ensmallen is the Rust/Python high-performance graph processing submodule of the GRAPE library.☆40Sep 29, 2025Updated 6 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- XPO represents anatomical, cellular, and gene function phenotypes occurring throughout the development of the African frogs Xenopus laevi…☆11Jul 25, 2025Updated 8 months ago
- Clinical Research Informatics☆13Aug 23, 2023Updated 2 years ago
- KGX is a Python library for exchanging Knowledge Graphs☆140Feb 5, 2026Updated 2 months ago
- Mondo Disease Ontology☆296Apr 10, 2026Updated last week
- ETL UK-Biobank☆17Nov 17, 2022Updated 3 years ago
- Services and guidelines for normalizing drug and other therapy terms☆13Feb 26, 2026Updated last month
- Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.☆265Apr 8, 2026Updated last week