Alternatives and similar repositories for RNA-KG:

Users that are interested in RNA-KG are comparing it to the libraries listed below

• biopragmatics / bioversions
  🪝 What's the latest version for each database?
  ☆27Updated this week
• ckoenigs / PharMeBINet
  Build PharMeBINet from different sources.
  ☆16Updated last month
• bio2bel / bio2bel
  A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)
  ☆21Updated 3 years ago
• biocypher / clinical-knowledge-graph
  ☆18Updated 10 months ago
• menchelab / MultiOme
  Network-based project to explore gene connectivity through biological scales
  ☆23Updated 6 months ago
• PathwayMerger / PathMe
  Harmonizing pathway databases using Biological Expression Language (BEL)
  ☆19Updated 10 months ago
• biopragmatics / biomappings
  🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…
  ☆53Updated last week
• EBISPOT / OXO
  Ontology cross-reference and mapping service
  ☆18Updated this week
• ncats / stitcher
  A stitching platform for InXight
  ☆15Updated last month
• GuiltyTargets / guiltytargets
  Target prioritization using network representation learning
  ☆11Updated 3 years ago
• ncbi / GNorm2
  ☆20Updated last year
• AstraZeneca / skywalkR
  code for Gogleva et al manuscript
  ☆45Updated 2 years ago
• pathwayforte / pathway-forte
  A Python package for benchmarking pathway database with functional enrichment and classification methods
  ☆13Updated 4 years ago
• obophenotype / provisional_cell_ontology
  Draft cell type definitions from data - candidates for inclusion in CL
  ☆12Updated 3 months ago
• dhimmel / integrate
  Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing
  ☆32Updated 7 years ago
• gyorilab / pybiopax
  PyBioPAX: A python implementation of the BioPAX object model
  ☆24Updated 11 months ago
• Case-esaC / iDrug
  ☆19Updated 4 years ago
• ncbi / tmVar3
  ☆17Updated last year
• SuLab / DrugMechDB
  A database of paths that represent the mechanism of action from a drug to a disease in an indication.
  ☆61Updated last year
• adam-sam-brown / repoDB
  A Standard Database for Drug Repositioning
  ☆19Updated 7 years ago
• danasilv / Diffuse2Direct
  Orientation of the protein-protein interaction network using network diffusion techniques
  ☆15Updated 4 years ago
• healx / automated-biological-evidence-generation-in-drug-discovery
  Example code and data samples for "An experimentally validated approach to automated biological evidence generation in drug discovery usi…
  ☆11Updated last year
• krishnanlab / txt2onto
  Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.
  ☆24Updated 8 months ago
• kundajelab / coessentiality
  Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)
  ☆27Updated 2 years ago
• krishnanlab / PyGenePlexus
  A network based gene classification library to generate genome wide predictions about genes that are functionally similar to the input ge…
  ☆20Updated this week
• NeilPearson-Lilly / TractaViewer
  ☆11Updated 5 years ago
• AbbVie-ComputationalGenomics / genetic-evidence-approval
  ☆24Updated 4 years ago
• OntoGene / OGER
  ☆24Updated 4 years ago
• MindRank-Biotech / PharmKG
  ☆55Updated 4 years ago
• ayushnoori / metapaths
  Similarity search in heterogeneous knowledge graphs using meta paths.
  ☆25Updated 2 years ago