MotomuMatsui / gsLinks
Graph Splitting Method
☆14Updated 6 years ago
Alternatives and similar repositories for gs
Users that are interested in gs are comparing it to the libraries listed below
Sorting:
- MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.☆62Updated 2 weeks ago
- ☆13Updated this week
- Find clustered hits from a BLAST search☆120Updated 8 months ago
- DDBJ Fast Annotation and Submission Tool☆82Updated 4 months ago
- Python tool to reduce size and redundancy of phylogenetic datasets☆45Updated 2 years ago
- Supporting code for uncultivated gut virus manuscript☆72Updated 2 years ago
- ☆131Updated last year
- ☆27Updated 5 years ago
- A tool for drawing ANI clustermap between all-vs-all microbial genomes☆86Updated 4 months ago
- Providing up-to-date phage genome databases, metrics and useful input files for a number of bioinformatic pipelines.☆71Updated 4 months ago
- Bioinformatics tool for Locus Visualisation☆122Updated 3 months ago
- GenoVi, an automated customizable circular genome visualizer for bacteria and archaea☆96Updated 2 years ago
- Effector prediction pipeline based on protein properties.☆15Updated last month
- sensitive and precise assembly of short sequencing reads☆161Updated 10 months ago
- A pipeline to computationally identify invertible DNA regions and quantify their orientations.☆29Updated last year
- ☆22Updated last year
- viralVerify: viral contig verification tool☆72Updated 4 years ago
- Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.☆147Updated last month
- Phage Annotation using Protein Structures☆123Updated last week
- Systematic search of all known anti-phage systems.☆114Updated 2 months ago
- BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a f…☆36Updated 6 years ago
- Follow up to Grace Blackwell's 661k dataset, for 2023☆115Updated 2 weeks ago
- A tool for representing genomic potential and transcriptomic expression into KEGG pathways☆59Updated last year
- VirBot: a protein-based RNA virus detector for metagenomic data☆33Updated last year
- FunGAP: fungal Genome Annotation Pipeline☆111Updated 2 months ago
- Bioinformatics tool to find integrons in bacterial genomes☆81Updated 3 months ago
- Download files from NCBI Entrez by accession☆127Updated last year
- A toolkit for exploring prokaryotic methylation and base modifications in nanopore sequencing☆49Updated 2 months ago
- Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!☆169Updated 2 weeks ago
- VirHostMatcher: matching hosts of viruses based on oligonucleotide frequency (ONF) comparison☆31Updated 7 years ago