MotomuMatsui / gsLinks
Graph Splitting Method
☆14Updated 5 years ago
Alternatives and similar repositories for gs
Users that are interested in gs are comparing it to the libraries listed below
Sorting:
- DDBJ Fast Annotation and Submission Tool☆79Updated last month
- ☆28Updated 5 years ago
- ☆12Updated last month
- Python tool to reduce size and redundancy of phylogenetic datasets☆41Updated 2 years ago
- Molecular convergence detection☆38Updated this week
- Detection of pseudogene candidates in bacterial and archaeal genomes.☆49Updated last year
- Assembly statistic visualisation☆90Updated last year
- BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins☆68Updated 8 months ago
- viralVerify: viral contig verification tool☆69Updated 3 years ago
- Tiberius is a deep learning gene finder.☆61Updated this week
- Assembly methods for nanopore-based metagenomic sequencing: a comparative study☆18Updated 5 years ago
- Reference-quality genome reconstruction from complex metagenomes (or bacterial isolates) using only Nanopore long reads or both long and …☆32Updated last year
- A tool for representing genomic potential and transcriptomic expression into KEGG pathways☆57Updated 10 months ago
- FastOMA is a scalable software package to infer orthology relationship.☆76Updated this week
- BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a f…☆34Updated 6 years ago
- Bioinformatics tool for Locus Visualisation☆106Updated 3 weeks ago
- PANgenome with Annotations, COre identification, Tree and corresponding Alignments☆73Updated last year
- ☆71Updated last month
- The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.☆42Updated 2 months ago
- A Python package for obtaining complete lineages and the lowest common ancestor (LCA) from a set of taxonomic identifiers☆50Updated 4 months ago
- a UNIX shell toolkit for processing and analyzing multiple sequence alignments and phylogenies☆73Updated last month
- GenoVi, an automated customizable circular genome visualizer for bacteria and archaea☆94Updated last year
- A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category☆66Updated last month
- A tool for drawing ANI clustermap between all-vs-all microbial genomes☆81Updated last month
- A toolkit for exploring prokaryotic methylation and base modifications in nanopore sequencing☆48Updated 3 weeks ago
- SynVisio is an interactive multiscale visualization tool that lets you explore the results of McScanX a popular synteny and collinearity …☆83Updated last year
- Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates☆65Updated 2 weeks ago
- NLR annotation tool☆27Updated last year
- Follow up to Grace Blackwell's 661k dataset, for 2023☆105Updated 2 weeks ago
- A tool for generating bacterial genomes from metagenomes with nanopore long read sequencing☆70Updated 3 years ago