MotomuMatsui / gsLinks
Graph Splitting Method
☆14Updated 6 years ago
Alternatives and similar repositories for gs
Users that are interested in gs are comparing it to the libraries listed below
Sorting:
- Supporting code for uncultivated gut virus manuscript☆75Updated 2 years ago
- Find clustered hits from a BLAST search☆125Updated 2 weeks ago
- DDBJ Fast Annotation and Submission Tool☆83Updated 2 months ago
- ☆132Updated last year
- Python tool to reduce size and redundancy of phylogenetic datasets☆47Updated 2 years ago
- A tool for representing genomic potential and transcriptomic expression into KEGG pathways☆59Updated last year
- MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.☆69Updated last month
- Bacterial Annotation by Learned Representation of Genes☆58Updated 4 years ago
- Providing up-to-date phage genome databases, metrics and useful input files for a number of bioinformatic pipelines.☆74Updated 7 months ago
- Predict prokaryotic host for phage metagenomic sequences☆52Updated last year
- PHANOTATE: a gene caller for phages.☆78Updated 11 months ago
- A Python package for obtaining complete lineages and the lowest common ancestor (LCA) from a set of taxonomic identifiers☆50Updated 9 months ago
- A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category☆74Updated 6 months ago
- A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data☆88Updated 3 months ago
- BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a f…☆37Updated 6 years ago
- Tiberius is a deep learning gene finder.☆81Updated this week
- Bioinformatics tool to find integrons in bacterial genomes☆82Updated 6 months ago
- A fully automated gene annotator from RNA-Seq expression data☆60Updated 2 years ago
- Effector prediction pipeline based on protein properties.☆14Updated 3 months ago
- viralVerify: viral contig verification tool☆72Updated 4 years ago
- Bioinformatics tool for Locus Visualisation☆141Updated 2 weeks ago
- GenoVi, an automated customizable circular genome visualizer for bacteria and archaea☆98Updated 2 years ago
- ☆27Updated 5 years ago
- Mining CRISPRs in Environmental Datasets☆112Updated 2 years ago
- sensitive and precise assembly of short sequencing reads☆161Updated last year
- ☆23Updated last year
- A pipeline to computationally identify invertible DNA regions and quantify their orientations.☆29Updated last year
- Phage Annotation using Protein Structures☆134Updated this week
- Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.☆157Updated 3 weeks ago
- ☆13Updated this week