Alternatives and similar repositories for gs

Users that are interested in gs are comparing it to the libraries listed below

• gem-pasteur / macsyfinder
  MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.
  ☆70Updated 2 weeks ago
• gamcil / cblaster
  Find clustered hits from a BLAST search
  ☆129Updated last month
• Tomikent / Capsid_community
  ☆14Updated 3 weeks ago
• nigyta / dfast_core
  DDBJ Fast Annotation and Submission Tool
  ☆83Updated 4 months ago
• jessieren / VirHostMatcher
  VirHostMatcher: matching hosts of viruses based on oligonucleotide frequency (ONF) comparison
  ☆31Updated 7 years ago
• snayfach / MGV
  Supporting code for uncultivated gut virus manuscript
  ☆77Updated 2 years ago
• RyanCook94 / inphared
  Providing up-to-date phage genome databases, metrics and useful input files for a number of bioinformatic pipelines.
  ☆75Updated 8 months ago
• shoichisakaguchi / NeoRdRp
  ☆23Updated last year
• iquasere / KEGGCharter
  A tool for representing genomic potential and transcriptomic expression into KEGG pathways
  ☆61Updated last year
• GreyGuoweiChen / VirBot
  VirBot: a protein-based RNA virus detector for metagenomic data
  ☆34Updated last year
• fmenardo / Treemmer
  Python tool to reduce size and redundancy of phylogenetic datasets
  ☆48Updated last month
• nselem / corason
  Bioinformatic Tools for study Evolution of metabolic diversity
  ☆38Updated last year
• robotoD / GenoVi
  GenoVi, an automated customizable circular genome visualizer for bacteria and archaea
  ☆100Updated 2 years ago
• steineggerlab / Metabuli
  Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.
  ☆159Updated last week
• Tropini-lab / PUPpy
  Pipeline to design taxon-specific primes in defined bacterial communities.
  ☆23Updated 11 months ago
• soedinglab / WIsH
  Predict prokaryotic host for phage metagenomic sequences
  ☆52Updated last year
• feargalr / Demovir
  Taxonomic classification of viruses at Order and Family level
  ☆21Updated 2 years ago
• deprekate / PHANOTATE
  PHANOTATE: a gene caller for phages.
  ☆80Updated last year
• happykhan / BRIG
  BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a f…
  ☆37Updated 6 years ago
• art-egorov / lovis4u
  Bioinformatics tool for Locus Visualisation
  ☆156Updated 2 months ago
• JustineCharon / RdRp-scan
  Exploring the "dusk matter" of the RNA virosphere
  ☆35Updated 3 years ago
• moshi4 / COGclassifier
  A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category
  ☆76Updated 8 months ago
• functional-dark-side / agnostos-wf
  ☆45Updated 2 years ago
• KatyBrown / CIAlign
  ☆133Updated last year
• cjneely10 / MetaSanity
  Pipeline for major biological analyses.
  ☆36Updated 3 years ago
• EBI-Metagenomics / mettannotator
  ☆81Updated last month
• patrickwest / EukRep
  Classification of Eukaryotic and Prokaryotic sequences from metagenomic datasets
  ☆75Updated last year
• Hydro3639 / NanoPhase
  Reference-quality genome reconstruction from complex metagenomes (or bacterial isolates) using only Nanopore long reads or both long and …
  ☆33Updated 2 years ago
• evolbioinfo / booster
  ☆28Updated 5 years ago
• shenwei356 / gtdb-taxdump
  GTDB taxonomy taxdump files with trackable TaxIds
  ☆57Updated 8 months ago