MonashProteomics / FragPipe-AnalystLinks
Documentation is available here:
☆17Updated 3 weeks ago
Alternatives and similar repositories for FragPipe-Analyst
Users that are interested in FragPipe-Analyst are comparing it to the libraries listed below
Sorting:
- Differential Expression Analysis tool box R lang package for omics data☆44Updated last week
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆51Updated last month
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆46Updated last year
- MS-DAP: downstream analysis pipeline for quantitative proteomics☆39Updated 4 months ago
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆28Updated 2 years ago
- This is a collection of minimal code to visualize various aspects of proteomics data.☆79Updated 3 years ago
- Report processing and protein quantification for MS-based proteomics☆46Updated 2 years ago
- R package - MSstats☆83Updated last week
- ☆55Updated 4 years ago
- pathway and network analysis for metabolomics☆41Updated last year
- ☆62Updated last year
- Construct database and identify metabolites.☆6Updated 2 years ago
- R-Shiny GUI integrated with the MSstats package family☆15Updated last month
- ☆24Updated 2 years ago
- Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics☆11Updated last month
- R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …☆29Updated 3 weeks ago
- R package for optimized LC-MS spectra processing☆25Updated 2 months ago
- tidymass☆56Updated 2 months ago
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆22Updated last month
- PDV: an integrative proteomics data viewer☆51Updated this week
- TimsR: Easy access to timsTOF Pro data from R.☆10Updated 4 years ago
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆79Updated last year
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆35Updated last year
- PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering☆117Updated last week
- The repo for LFQ-Analyst☆30Updated 11 months ago
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆91Updated 3 months ago
- Retrieving Information of Proteins from Uniprot☆68Updated last year
- This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…☆25Updated 7 months ago
- ☆27Updated 5 months ago
- DEqMS is a tool for quantitative proteomic analysis☆23Updated 3 months ago