Web-based software for visualization of molecular maps in 2D and 3D
☆28Jul 31, 2023Updated 2 years ago
Alternatives and similar repositories for ili
Users that are interested in ili are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Workflow for LC-MS feature analysis and spatial mapping☆20Jul 16, 2018Updated 7 years ago
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016☆12Mar 7, 2020Updated 6 years ago
- Lithops-based Serverless implementation of the METASPACE spatial metabolomics annotation pipeline☆12Jul 6, 2023Updated 3 years ago
- On-instrument and post-acquisition targeted feature extraction☆13Apr 24, 2026Updated 2 months ago
- Cloud engine and platform for metabolite annotation for imaging mass spectrometry☆58Jul 1, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆12Oct 3, 2023Updated 2 years ago
- Comparing and combining multiple metagenomic datasets☆16Oct 12, 2022Updated 3 years ago
- Neural networks for microbe-metabolite interaction analysis☆133Nov 4, 2022Updated 3 years ago
- ☆26Oct 9, 2020Updated 5 years ago
- MAss spectra alignment tool for MSI data☆20Jun 6, 2022Updated 4 years ago
- Software for the analysis and interactive exploration of spectral imaging data☆33Aug 25, 2020Updated 5 years ago
- This repo contains the code needed to run the R package Autotuner. Autotuner is used to identify proper parameters during metabolomics da…☆16Jan 21, 2021Updated 5 years ago
- Machine learning for molecules workshop 2022☆13Nov 30, 2022Updated 3 years ago
- Deblur is a greedy deconvolution algorithm based on known read error profiles.☆100Mar 8, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- MSDK source code repository☆41Sep 22, 2022Updated 3 years ago
- shotgun pipeline☆12Apr 3, 2019Updated 7 years ago
- Metabolomics Tools for Galaxy☆22Nov 22, 2016Updated 9 years ago
- Python library for large-scale targeted metabolomics.☆23Mar 2, 2026Updated 4 months ago
- A collection of common mz values found in mass spectrometry.☆21Jun 13, 2024Updated 2 years ago
- Pipeline for Evaluating Prokaryotic References☆11Sep 16, 2016Updated 9 years ago
- Dockerized version of the EBI Ontology Lookup Service☆10Aug 14, 2019Updated 6 years ago
- Using Biological Signals for Mass Recalibration of Mass Spectrometry Imaging Data☆11Apr 16, 2026Updated 2 months ago
- A pipeline for extracting SSU rRNA gene from wgs data and applying them for further diversity analysis☆10Jan 30, 2016Updated 10 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆36Jun 13, 2026Updated 3 weeks ago
- C++ lossless and lossy mass spectrometry compression☆15Sep 16, 2021Updated 4 years ago
- Python package to plot a phylogenetic tree on an existing matplotlib axis.☆29Jul 21, 2025Updated 11 months ago
- A logistic regression model for testing differential abundance in compositional microbiome data☆13Jul 25, 2023Updated 2 years ago
- ☆16Oct 3, 2023Updated 2 years ago
- An R package for non-targeted LC-MS metabolomics☆21Oct 31, 2025Updated 8 months ago
- K-mer Counting for Biological Sequence Analysis☆29Jan 23, 2026Updated 5 months ago
- A method of assessing sequence complexity based on kmer frequencies☆33Apr 9, 2018Updated 8 years ago
- The Biological Observation Matrix (BIOM) Format Project☆98Jun 1, 2026Updated last month
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Aug 25, 2023Updated 2 years ago
- An R package of High-resolution Informatics Toolbox for Maldi-imaging Proteomics☆19May 26, 2026Updated last month
- Dendrograms for Evolutionary Analysis☆12Dec 9, 2019Updated 6 years ago
- An easy to use and comprehensive python package which aids in the analysis and visualization of orthologous genes. 🐵☆28Apr 13, 2026Updated 2 months ago
- 🐦 spideog - Command line utility for Kraken2 reports.☆11Nov 30, 2020Updated 5 years ago
- Identify phenotype-specific k-mers and predict phenotype using sequenced bacterial strains☆21Jan 5, 2026Updated 6 months ago
- Command line client and Python libraries for CosmosID API☆13Oct 28, 2025Updated 8 months ago