MolecularCartography / ili
Web-based software for visualization of molecular maps in 2D and 3D
☆27Updated last year
Alternatives and similar repositories for ili:
Users that are interested in ili are comparing it to the libraries listed below
- Visualize differentially ranked features (taxa, metabolites, ...) and their log-ratios across samples☆33Updated 2 years ago
- Automated taxonomy decoration onto a tree☆15Updated last year
- Protein Alignment and Detection Interface☆61Updated 9 months ago
- Bayesian Inferential Regression for Differential Microbiome Analysis☆22Updated last year
- Robust Aitchison PCA from sparse count data☆33Updated 2 years ago
- Code and manual of the endoR R-package (Ruaud et al, in preparation).☆12Updated last year
- ☆18Updated last year
- Implementation of Krona to QIIME2☆15Updated 10 months ago
- PaperBLAST: find papers about a protein or its homologs☆38Updated last month
- Open source short linear motif discovery and sequence analysis☆23Updated 4 months ago
- Database of genomes integrated from the gut microbiome and other environments☆44Updated last year
- MicrobeDirectory 2.0☆22Updated 4 years ago
- annotation pipeline for microbial genomes and metagenomes☆18Updated 6 years ago
- A metagenomic strategy for harnessing the chemical repertoire of the human microbiome☆32Updated last year
- A package to annotate protein sequences☆54Updated 6 months ago
- Python bindings for the TaxonKit library☆33Updated 2 weeks ago
- ☆11Updated 5 years ago
- ☆12Updated 5 years ago
- OPAL: Open-community Profiling Assessment tooL☆27Updated this week
- PiGx SARS-CoV-2 wastewater sequencing pipeline☆18Updated last year
- DeepSig - Predictor of signal peptides in proteins based on deep learning☆25Updated last year
- Parse GFF3 into Pandas dataframes☆26Updated 10 months ago
- ☆30Updated 4 years ago
- ☆13Updated 6 years ago
- transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation☆25Updated 10 months ago
- Parse NCBI CD-search results to find and visualise the domain architecture of secondary metabolite synthases☆21Updated 2 years ago
- SMBGC Annotation using Neural Networks Trained on Interpro Signatures☆23Updated 9 months ago
- Analyses in R and Python Using curatedMetagenomicData☆28Updated last week
- ☆25Updated 4 years ago
- FishTaco (Functional Shifts Taxonomic Contributors) is a metagenomic computational framework that aims to identify the driver taxa of mic…☆24Updated 3 years ago