MolecularCartography / OptimusLinks
Workflow for LC-MS feature analysis and spatial mapping
☆20Updated 7 years ago
Alternatives and similar repositories for Optimus
Users that are interested in Optimus are comparing it to the libraries listed below
Sorting:
- IsoCor: Isotope Correction for mass spectrometry labeling experiments☆25Updated 6 months ago
- MSDK source code repository☆40Updated 3 years ago
- A small library to provide peak picking for software processing mass spectrometry data☆23Updated 11 months ago
- ☆26Updated last year
- Python pipeline for metabolomics data preprocessing, QC, standardization and annotation☆15Updated 3 months ago
- A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆16Updated last year
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆23Updated last year
- NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.☆33Updated 4 years ago
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆16Updated 2 years ago
- Mass spectral library manager☆13Updated 5 years ago
- Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.☆17Updated last year
- geoRge: a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics☆11Updated 4 years ago
- ☆15Updated 4 years ago
- Relaunch of the initial MetFrag project.☆19Updated 3 weeks ago
- metabolite identification R-package for metabolomic high-resolution LC-MS datasets.☆16Updated 8 years ago
- Flash entropy search☆16Updated 2 years ago
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆28Updated 5 months ago
- sirius-libs - Metabolomics mass spectrometry framework for molecular formula identification of small molecules written in Java☆54Updated last year
- Group-DIA, a software for analyzing multiple DIA data files☆13Updated 8 years ago
- A set of metabolomics tools for use in Galaxy☆11Updated 3 years ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆19Updated last year
- Scalable and self-optimizing processing workflow for untargeted LC-MS☆29Updated last year
- ☆36Updated this week
- ☆15Updated 5 months ago
- Spectral entropy for mass spectrometry data.☆34Updated last month
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆33Updated last month
- G-Aligner: a graph-based feature alignment method for untargeted LC-MS-based metabolomics☆17Updated last year
- Mass spectrometry data visualization☆37Updated 4 years ago
- pathway and network analysis for metabolomics☆43Updated last year
- ☆16Updated 3 years ago