biocheming / AF3_mmseqs2Links
Alphafold3 using mmseqs2-gpu for sequence query
☆35Updated 8 months ago
Alternatives and similar repositories for AF3_mmseqs2
Users that are interested in AF3_mmseqs2 are comparing it to the libraries listed below
Sorting:
- A command-line interface and Python library for generating AlphaFold3 input files.☆38Updated last month
- ☆32Updated 3 weeks ago
- A domain parser for Alphafold models☆46Updated 2 years ago
- Machine learning prediction of enzyme optimum pH☆50Updated 9 months ago
- GTalign, high-performance protein structure alignment, superposition and search☆54Updated 5 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆46Updated 8 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- ☆33Updated last year
- ColabFold protocol☆56Updated last year
- ☆63Updated 2 months ago
- scripts and facilities for in-silico mutagenesis with FoldX☆66Updated last month
- ☆56Updated 5 months ago
- Learning the language of protein-protein interactions☆131Updated 3 weeks ago
- A tool for protein and protein complex structure prediction.☆29Updated 7 months ago
- Geometric deep learning of protein–DNA binding specificity☆76Updated 10 months ago
- Epitope Prediction Pipeline and analysis tools built around AlphaFold 2☆20Updated last year
- Code repository of "Deep generative design of RNA family sequences"☆40Updated 2 months ago
- Fast indexing and search of discontinuous motifs in protein structures☆113Updated this week
- Analysis of alphafold and colabfold results☆34Updated last month
- Step-by-step guide to install and configure AlphaFold 3 using a Conda Python 3.11 environment. No system-wide installations required. ✅ …☆40Updated last month
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆78Updated 5 months ago
- ☆50Updated 5 months ago
- ☆47Updated last year
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆72Updated last year
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆95Updated last month
- ☆23Updated 2 years ago
- Predicting high-fitness mutations based on protein inverse folding models☆75Updated 4 months ago
- ☆53Updated 7 months ago
- Graph Network for protein-protein interface including language model features☆34Updated last year
- Parametric Building of de novo Functional Topologies☆44Updated 3 years ago