MindRank-Biotech / PharmKGLinks
☆55Updated 4 years ago
Alternatives and similar repositories for PharmKG
Users that are interested in PharmKG are comparing it to the libraries listed below
Sorting:
- Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence…☆34Updated last month
- ☆66Updated last year
- [Bioinformatics 2021] This is the repo for the paper `SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summa…☆86Updated 10 months ago
- A Knowledge Graph for Relational Learning On Biological Data☆99Updated last year
- Example code and data samples for "An experimentally validated approach to automated biological evidence generation in drug discovery usi…☆11Updated last year
- Implementation of Using Drug Descriptions and Molecular Structures for Drug-Drug Interaction Extraction from Literature☆39Updated 4 years ago
- Biomedical Relation Extraction with Knowledge Graph-based Recommendations☆8Updated last year
- Source code and data repository for "Ensembles of knowledge graph embedding models improve predictions for drug discovery"☆20Updated last year
- Method for drug repurposing from knowledge graphs and literature☆34Updated 4 years ago
- Supplementary code for the paper: Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19☆27Updated 4 years ago
- ☆50Updated 3 years ago
- Source code for TKDE'22 "KG-MTL: Knowledge Graph Enhanced Multi-Task Learning for Molecular Interaction"☆28Updated 2 years ago
- Code to accompany the "Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs" (Briefings in B…☆17Updated last week
- ☆16Updated 3 years ago
- The Clinical Trials Knowledge Graph☆57Updated 2 years ago
- ☆34Updated 4 years ago
- ☆19Updated 5 years ago
- ☆56Updated 5 years ago
- Drug repurposing for COVID-19 using literature-based discovery☆28Updated 2 years ago
- Synthetic lethality (SL) is a promising gold mine for the discovery of anti-cancer drug targets. KG4SL is the first graph neural network …☆33Updated last year
- An end-to-end heterogeneous graph representation learning-based framework for drug-target interaction prediction☆30Updated 2 years ago
- The official code implementation for DREAMwalk in Python.☆20Updated last year
- COVID-19 Knowledge Graph: a computable, multi-modal, cause-and-effect knowledge model of COVID-19 pathophysiology☆44Updated 3 years ago
- Bi-Level Graph Neural Networks for Drug-Drug Interaction Prediction. ICML 2020 Graph Representation Learning and Beyond (GRL+) Workshop☆30Updated 4 years ago
- ☆23Updated 3 years ago
- Analysis notebooks and database interaction scripts for the nsides project☆19Updated 8 months ago
- [RECOMB 2023] Official implementation of "Pisces: A combo-wise contrastive learning approach to synergistic drug combination prediction".☆14Updated last year
- ☆11Updated 5 years ago
- Build PharMeBINet from different sources.☆16Updated 2 months ago
- ☆17Updated 2 years ago