Alternatives and similar repositories for PharmKG:

Users that are interested in PharmKG are comparing it to the libraries listed below

• AstraZeneca / kgem-in-drug-discovery
  Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence…
  ☆33Updated 6 months ago
• dsi-bdi / biokg
  A Knowledge Graph for Relational Learning On Biological Data
  ☆91Updated 10 months ago
• yueyu1030 / SumGNN
  [Bioinformatics 2021] This is the repo for the paper `SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summa…
  ☆84Updated 6 months ago
• snap-stanford / multiscale-interactome
  ☆65Updated last year
• ninglab / CTKG
  The Clinical Trials Knowledge Graph
  ☆54Updated last year
• bio-ontology-research-group / multi-drug-embedding
  Method for drug repurposing from knowledge graphs and literature
  ☆34Updated 4 years ago
• zch42 / BiFusion
  ☆32Updated 4 years ago
• Barabasi-Lab / COVID-19
  Supplementary code for the paper: Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19
  ☆27Updated 3 years ago
• ChengF-Lab / deepDR
  ☆53Updated 5 years ago
• enveda / kgem-ensembles-in-drug-discovery
  Source code and data repository for "Ensembles of knowledge graph embedding models improve predictions for drug discovery"
  ☆20Updated last year
• tticoin / DESC_MOL-DDIE
  Implementation of Using Drug Descriptions and Molecular Structures for Drug-Drug Interaction Extraction from Literature
  ☆35Updated 3 years ago
• Case-esaC / iDrug
  ☆19Updated 4 years ago
• haiya1994 / BERE
  ☆50Updated 2 years ago
• AstraZeneca / biomedical-kg-topological-imbalance
  Code to accompany the "Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs" (Briefings in B…
  ☆17Updated 2 months ago
• xiaomingaaa / drugbank
  drugbank相关数据的处理，包括获取药物sdf结构文件，drug相关信息，drug作用相关蛋白信息，drugbank中drug id与其他数据库的映射，protein蛋白相关信息到其他数据库的映射
  ☆18Updated 3 years ago
• kilicogluh / lbd-covid
  Drug repurposing for COVID-19 using literature-based discovery
  ☆27Updated 2 years ago
• SmartDataAnalytics / BioKEEN
  A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…
  ☆45Updated 2 years ago
• covid19kg / covid19kg
  COVID-19 Knowledge Graph: a computable, multi-modal, cause-and-effect knowledge model of COVID-19 pathophysiology
  ☆44Updated 3 years ago
• yangkuoone / HerGePred
  Heterogeneous disease-gene-related
  ☆18Updated 3 years ago
• Zora-LM / HGAN-DTI
  ☆17Updated last year
• rcelebi / GraphEmbedding4DDI
  ☆15Updated last year
• ckoenigs / PharMeBINet
  Build PharMeBINet from different sources.
  ☆14Updated this week
• OpenBioLink / OpenBioLink
  OpenBioLink is a resource and evaluation framework for evaluating link prediction models on heterogeneous biomedical graph data.
  ☆145Updated 9 months ago
• codeKgu / BiLevel-Graph-Neural-Network
  Bi-Level Graph Neural Networks for Drug-Drug Interaction Prediction. ICML 2020 Graph Representation Learning and Beyond (GRL+) Workshop
  ☆29Updated 4 years ago
• papercode-for-cheung / DeepMGT-DTI
  ☆16Updated 3 years ago
• xzenglab / KG-MTL
  Source code for TKDE'22 "KG-MTL: Knowledge Graph Enhanced Multi-Task Learning for Molecular Interaction"
  ☆26Updated 2 years ago
• xzenglab / KGNN
  Source Code for IJCAI'20 "KGNN: Knowledge Graph Neural Network for Drug-Drug Interaction Prediction"
  ☆88Updated 4 years ago
• xzenglab / MUFFIN
  ☆23Updated 3 years ago
• adam-sam-brown / repoDB
  A Standard Database for Drug Repositioning
  ☆18Updated 7 years ago