hybrid-kg / clepLinks
🤖 A Python Package for generating new patient representations driven by data and prior knowledge
☆24Updated 2 months ago
Alternatives and similar repositories for clep
Users that are interested in clep are comparing it to the libraries listed below
Sorting:
- Exploring the space of drug combinations to discover synergistic drugs using Active Learning☆24Updated last year
- Deep Graph Mapper: Seeing Graphs through the Neural Lens☆58Updated 2 years ago
- Implementation of Neural Distance Embeddings for Biological Sequences (NeuroSEED) in PyTorch (NeurIPS 2021)☆73Updated 2 years ago
- Readings for "A Unified View of Relational Deep Learning for Drug Pair Scoring." (IJCAI 2022)☆98Updated 3 years ago
- A Generative Adversarial Network Model Alternative to Animal Studies for Clinical Pathology Assessment☆14Updated last year
- ☆19Updated last year
- Code for the KDD 2021 paper 'Filtration Curves for Graph Representation'☆18Updated 2 years ago
- Bi-Level Graph Neural Networks for Drug-Drug Interaction Prediction. ICML 2020 Graph Representation Learning and Beyond (GRL+) Workshop☆30Updated 5 years ago
- 📊 Results from the reproducibility and benchmarking studies presented in "Bringing Light Into the Dark: A Large-scale Evaluation of Know…☆36Updated 3 years ago
- Graph Self-Supervised Learning Toolkit☆43Updated 6 months ago
- 🏘️ Hubness reduced nearest neighbor search for entity alignment with knowledge graph embeddings☆27Updated last year
- Disease subnetwork detection with explainable Graph Neural Networks☆26Updated last year
- Simplicial neural network benchmarking software☆17Updated 3 years ago
- A toolkit for developing foundation models using Electronic Health Record (EHR) data.☆48Updated last week
- Coherent Deconfounding Autoencoder (CODE-AE) can extract both common biological signals shared by incoherent samples and private represen…☆21Updated last year
- Drug repurposing for COVID-19 using literature-based discovery☆29Updated 3 years ago
- Approximate subgraph motif mining through learnable edge contraction.☆13Updated 2 years ago
- SHEPHERD: Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases☆77Updated 5 months ago
- Code for paper "A deep learning framework for drug repurposing via emulating clinical trials on real world patient data" (Accepted to Nat…☆100Updated 3 years ago
- Combinatorial prediction of therapeutic perturbations using causally-inspired neural networks☆100Updated 2 months ago
- ☆28Updated 3 years ago
- An SKLearn-style toolbox for estimating and analyzing models, distributions, and functions with context-specific parameters.☆76Updated 2 weeks ago
- ☆35Updated 2 years ago
- The first GANs-based omics-to-omics translation framework☆14Updated 2 years ago
- ☆22Updated 2 years ago
- A Knowledge Graph for Relational Learning On Biological Data☆107Updated last year
- code for Gogleva et al manuscript☆46Updated 3 years ago
- Deep Large-Scale Inference UsingKnockoffs☆11Updated 4 years ago
- Repository for ICLR'23 Long-tailed Learning Requires Feature Learning☆10Updated 2 years ago
- Learning clinical-decision rules with interpretable models.☆20Updated 2 years ago