BridgeDPI: A Novel Graph Neural Network for Predicting Drug-Protein Interactions
☆20Dec 25, 2024Updated last year
Alternatives and similar repositories for BridgeDPI
Users that are interested in BridgeDPI are comparing it to the libraries listed below
Sorting:
- the codes for paper "IIFDTI: predicting drug target interaction through interactive and independent features based on attention mechanism…☆11Apr 7, 2022Updated 3 years ago
- ☆11Jun 4, 2021Updated 4 years ago
- MSA-Regularized Protein Sequence Transformer toward Predicting Genome-Wide Chemical-Protein Interactions: Application to GPCRome Deorphan…☆11Oct 16, 2022Updated 3 years ago
- a method for CPI and DTA prediction☆11Jun 18, 2022Updated 3 years ago
- This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…☆27Sep 28, 2021Updated 4 years ago
- ☆13Feb 24, 2021Updated 5 years ago
- ☆12Jun 19, 2021Updated 4 years ago
- ☆20May 10, 2022Updated 3 years ago
- ☆14Jun 22, 2022Updated 3 years ago
- Processing high-throughput drug indication resources.☆19Mar 15, 2016Updated 9 years ago
- ☆17Apr 28, 2020Updated 5 years ago
- A surface-based deep learning approach for the prediction of ligand binding sites on proteins☆44Apr 22, 2023Updated 2 years ago
- InterpretableDTIP☆20Jul 30, 2018Updated 7 years ago
- ☆21Feb 22, 2024Updated 2 years ago
- Drug-Drug Interaction Prediction Based on Knowledge Graph Embeddings and Convolutional-LSTM Network☆98Oct 9, 2019Updated 6 years ago
- Cloud GPU supported NAMD3-based binding free energy difference between two small molecules against the same protein target. This is prob…☆29Nov 2, 2025Updated 4 months ago
- An official implementation of Protein Representation Learning via Knowledge Enhanced Primary Structure Reasoning☆28Jul 14, 2023Updated 2 years ago
- ☆31Feb 22, 2022Updated 4 years ago
- ☆32Jun 17, 2021Updated 4 years ago
- ☆38Oct 8, 2021Updated 4 years ago
- ☆28Aug 20, 2022Updated 3 years ago
- DeepAAI☆35Dec 25, 2024Updated last year
- Python module for identification of conserved water molecules from molecular dynamics trajectories.☆14Feb 12, 2026Updated 3 weeks ago
- ANN4EEG is a convolutional neural network toolkit for EEG-mediated drug-target interaction prediction. This approach for drug-target inte…☆13Feb 15, 2024Updated 2 years ago
- Drug-Drug Interaction Predicting by Neural Network Using Integrated Similarity☆29Apr 4, 2021Updated 4 years ago
- An end-to-end heterogeneous graph representation learning-based framework for drug-target interaction prediction☆31Jul 5, 2022Updated 3 years ago
- A bi-directional attention neural network for compound–protein interaction and binding affinity prediction.☆33Dec 1, 2022Updated 3 years ago
- Fast and easy contact prediction.☆38May 24, 2024Updated last year
- App for serotonergic targets☆12Jan 8, 2026Updated last month
- Public version for DistPepFold☆10Jul 17, 2025Updated 7 months ago
- pymol implementation of WaterDock with Akshay Sridhar (@akshay-sridhar) and refactoring work by Patrick McCubbin (@mccubbinp)☆11Mar 25, 2024Updated last year
- NRLMFβ: Bata-distribution-rescored Neighborhood Regularized Logistic Matrix Factorization for Improving Performance of Drug–Target Intera…☆11Oct 12, 2021Updated 4 years ago
- An official Molecule Transformer Drug Target Interaction (MT-DTI) model☆35Nov 6, 2020Updated 5 years ago
- Analysis of contacts in molecular dynamics trajectories☆45Nov 4, 2019Updated 6 years ago
- This is The repository for Paper "AttentionSiteDTI: Attention Based Model for Predicting Drug-Target Interaction Using Graph Representati…☆46Dec 8, 2023Updated 2 years ago
- Source Code for IJCAI'20 "KGNN: Knowledge Graph Neural Network for Drug-Drug Interaction Prediction"☆93Feb 11, 2021Updated 5 years ago
- ☆14Jan 10, 2021Updated 5 years ago
- ☆16Sep 4, 2025Updated 6 months ago
- A collection of virtual screening benchmarking☆12Sep 16, 2023Updated 2 years ago