☆74Jul 6, 2023Updated 2 years ago
Alternatives and similar repositories for multiscale-interactome
Users that are interested in multiscale-interactome are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The official code implementation for DREAMwalk in Python.☆30Jul 28, 2023Updated 2 years ago
- Work on designing a graph co-attention algorithm.☆18Jul 22, 2023Updated 2 years ago
- PhenoPLIER☆15Apr 8, 2024Updated last year
- User-friendly extensions to the Disease Ontology☆20Sep 9, 2016Updated 9 years ago
- The Supplementary data in the paper "A Survey and Systematic Assessment of Computational Methods for Drug Response Prediction"☆12Sep 27, 2019Updated 6 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆24Mar 2, 2026Updated 3 weeks ago
- L1000 peak deconvolution based on Bayesian analysis☆28Oct 10, 2021Updated 4 years ago
- Profiler for metagenomics based on NGLess☆13Feb 22, 2024Updated 2 years ago
- Multimodal Transformers for biomedical text and Knowledge Graph data☆34Mar 3, 2023Updated 3 years ago
- ☆58Nov 15, 2020Updated 5 years ago
- ☆25Dec 12, 2025Updated 3 months ago
- Network-based module discovery algorithm with high rate of empirically-validated term calls☆14Oct 22, 2023Updated 2 years ago
- Multi-omics biomarker discovery tool exploiting a gene-gene interaction network☆17Apr 9, 2024Updated last year
- ☆20Aug 28, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Library of Integrated Cellular Signatures L1000☆30Apr 21, 2022Updated 3 years ago
- Drug repositioning with adaptive graph convolutional networks☆18Sep 22, 2024Updated last year
- Python package to load and query ARCHS4 data☆27Jul 25, 2025Updated 8 months ago
- Algorithms for prediction of drug-target interactions via computational (chemogenomic) methods☆48Apr 26, 2019Updated 6 years ago
- ☆16Sep 5, 2023Updated 2 years ago
- Network-based project to explore gene connectivity through biological scales☆23Oct 21, 2024Updated last year
- The official implementation of LinkerNet: Fragment Poses and Linker Co-Design with 3D Equivariant Diffusion (NeurIPS 2023 Spotlight)☆17Feb 23, 2024Updated 2 years ago
- OpenBioLink is a resource and evaluation framework for evaluating link prediction models on heterogeneous biomedical graph data.☆158May 3, 2024Updated last year
- 中药网络药理学,包括预后基因筛选,分子对接,分子验证,各类图表的绘制等,设计了Python和R语言两种版本。The whole process of TCM network pharmacology, including prognostic gene screening,…☆23Nov 20, 2025Updated 4 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- The official code implementation for Chromoformer in PyTorch. (Lee et al., Nature Communications. 2022)☆37Aug 16, 2023Updated 2 years ago
- Assorted tools for interacting with .gct, .gctx files and other Connectivity Map (Broad Institute) data/tools☆140Jul 19, 2022Updated 3 years ago
- ☆18Apr 6, 2023Updated 2 years ago
- Clinical Knowledge Graph (CKG) is a platform with twofold objective: 1) build a graph database with experimental data and data imported f…☆587Sep 11, 2025Updated 6 months ago
- ☆10Jul 15, 2016Updated 9 years ago
- ☆12Dec 5, 2018Updated 7 years ago
- Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence…☆34Jan 8, 2026Updated 2 months ago
- NetICS: network-based integration of multi-omics data for prioritizing cancer genes☆16Jun 27, 2021Updated 4 years ago
- NRLMFβ: Bata-distribution-rescored Neighborhood Regularized Logistic Matrix Factorization for Improving Performance of Drug–Target Intera…☆11Oct 12, 2021Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Graph Embedding Evaluation / Code and Datasets for "Graph Embedding on Biomedical Networks: Methods, Applications, and Evaluations" (Bi…☆230Apr 14, 2020Updated 5 years ago
- A Standard Database for Drug Repositioning☆19Jul 28, 2017Updated 8 years ago
- ☆10Jun 15, 2017Updated 8 years ago
- ☆10Aug 22, 2018Updated 7 years ago
- Python, R and Matlab implementation of Brown's Method to combine dependent P-values☆25Feb 12, 2018Updated 8 years ago
- GraphCDR: A graph neural network method with contrastive learning for cancer drug response prediction☆31Sep 27, 2021Updated 4 years ago
- Therapeutics Commons (TDC): Multimodal Foundation for Therapeutic Science☆1,220Jul 13, 2025Updated 8 months ago