snap-stanford / multiscale-interactome
☆66Updated last year
Alternatives and similar repositories for multiscale-interactome:
Users that are interested in multiscale-interactome are comparing it to the libraries listed below
- ☆55Updated 4 years ago
- Supplementary code for the paper: Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19☆27Updated 3 years ago
- Toolbox - generic utilities for data processing (e.g., parsing, proximity, guild scoring, etc...)☆109Updated 2 years ago
- Network-based project to explore gene connectivity through biological scales☆23Updated 4 months ago
- ☆16Updated 3 years ago
- A Knowledge Graph for Relational Learning On Biological Data☆91Updated 11 months ago
- A deep learning framework for high-throughput mechanism-driven phenotype screening☆49Updated 3 years ago
- Synthetic lethality (SL) is a promising gold mine for the discovery of anti-cancer drug targets. KG4SL is the first graph neural network …☆31Updated last year
- Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence…☆33Updated 6 months ago
- ☆53Updated 5 years ago
- Orientation of the protein-protein interaction network using network diffusion techniques☆15Updated 3 years ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- ☆33Updated 4 years ago
- Biological Network Integration using Convolutions☆62Updated last year
- ☆19Updated 4 years ago
- Bioinformatics 2020: Graph Neural Networks for DNA Sequence Classification☆33Updated 4 years ago
- MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction☆53Updated 4 years ago
- Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…☆60Updated last year
- Amino Acid Embedding Representation as Machine Learning Features☆19Updated 6 years ago
- SkipGNN: Predicting Molecular Interactions with Skip-Graph Networks (Scientific Reports)☆64Updated 4 years ago
- ☆62Updated 5 years ago
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆50Updated 9 months ago
- ☆23Updated last year
- ☆33Updated last year
- The official code implementation for DREAMwalk in Python.☆17Updated last year
- ☆15Updated 5 months ago
- A collection of research papers, datasets and software related to knowledge graphs for drug discovery. Accompanies the paper "A review of…☆218Updated 7 months ago
- Contextual AI models for single-cell protein biology☆79Updated 2 weeks ago
- Gene2Vec: Distributed Representation of Genes Based on Co-Expression☆113Updated 2 years ago
- KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph☆55Updated 3 weeks ago