The Pathway Interaction Database (PID) is software supporting the access and display of information about bio-molecular interactions and cellular processes assembled into signaling pathways.
☆15Jun 18, 2026Updated 2 months ago
Alternatives and similar repositories for pathway-interaction-database
Users that are interested in pathway-interaction-database are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Mar 26, 2026Updated 5 months ago
- TCGA data acquisition and processing for Project Cognoma☆23Apr 19, 2018Updated 8 years ago
- ☆19Jun 18, 2026Updated 2 months ago
- protein backbone refinement☆16Sep 12, 2024Updated last year
- A nextflow implementation of Kallisto & Sleuth RNA-Seq Tools☆24Jun 3, 2018Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Fast Training of Support Vector Machines for Survival Analysis☆11Dec 28, 2016Updated 9 years ago
- A project to capture biological pathway data from academic papers☆29Mar 24, 2025Updated last year
- Open source platform for the complete machine learning lifecycle☆15Aug 25, 2018Updated 8 years ago
- Survival Support Vector Analysis☆20Apr 4, 2025Updated last year
- API for the IGS data portal☆11May 6, 2021Updated 5 years ago
- Models the Reactome knowledgebase into a interconnected graph☆22Updated this week
- Analysis tool for Nanopore sequencing data☆11Apr 26, 2024Updated 2 years ago
- Official repository for GDC User Guides in Markdown format☆68Jun 18, 2026Updated 2 months ago
- Started as a Team Project for CS690D at UMass Amherst, now turning into pytorch implementation of hyperbolic neural networks using Poinca…☆12Dec 8, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- find large indels (in the blind spot between GATK/freebayes and SV callers)☆39Dec 3, 2017Updated 8 years ago
- Opal is a toolkit for that enables rapid deployment of scientific applications as Web services☆12Jul 11, 2022Updated 4 years ago
- Predicting oncogenic potential of gene fusions☆12Feb 13, 2016Updated 10 years ago
- FASTAptamer: A Bioinformatic Toolkit for High-Throughput Sequence Analysis of Combinatorial Selections☆11Oct 7, 2024Updated last year
- ☆59Nov 15, 2020Updated 5 years ago
- Processing and analysis of data coming from Illumina sequencing machines☆11Aug 20, 2026Updated last week
- Survival analysis using Deep Learning.☆15Apr 12, 2023Updated 3 years ago
- A list of resources for metadata tools, standards and/or development☆12Jun 20, 2018Updated 8 years ago
- Deduplication for cfDNA sequencing data☆11Jul 5, 2017Updated 9 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Singularity port of HLA typing based on an input exome BAM file and is currently infers infers alleles for the three major MHC class I (…☆15Jan 15, 2017Updated 9 years ago
- Process Illumina instrument data into SAM/BAM/CRAM files.☆10Jul 6, 2026Updated last month
- Sonification middleware☆12Oct 7, 2020Updated 5 years ago
- Mutation Spectra Analysis☆10Mar 15, 2018Updated 8 years ago
- StackStorm packs to automate sequencing center operations☆10Dec 6, 2022Updated 3 years ago
- Notebook for standardization of actvity data, nonadditivity analysis and its evaluation.☆12Mar 16, 2023Updated 3 years ago
- Pipeline for Illumina shotgun sequencing of 16S rRNA amplicon sequences☆14Sep 2, 2016Updated 9 years ago
- Create a citation graph from pubmed data using R☆10Nov 4, 2016Updated 9 years ago
- Publication and sharing with Jupyter notebooks for reproducible research☆10May 10, 2019Updated 7 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Python library (C++ backend) for degree-preserving network randomization☆14Oct 14, 2019Updated 6 years ago
- This is a read-only mirror of the CRAN R package repository. SNFtool — Similarity Network Fusion☆23Jun 11, 2021Updated 5 years ago
- Tool for analysing viral diversity from High Throughput Sequencing☆12Nov 20, 2025Updated 9 months ago
- Berkeley's Data8 Infrastructure specific documentation & guides☆10Jun 22, 2020Updated 6 years ago
- A simple IPython/Jupyter cell magic command to display name and version of imported modules.☆16Aug 27, 2017Updated 9 years ago
- Pipeline to implement a "TAD_Pathways" analysis. Discover candidate genes based on association signals in TADs☆11Dec 21, 2019Updated 6 years ago
- MiranDa: Mimicking the learning process of human doctors to achieve causal inference for medication recommendation☆13Jan 19, 2026Updated 7 months ago