cansyl / CROssBARLinks
Comprehensive Resource of Biomedical Relations with Deep Learning Applications and Knowledge Graph Representations
☆32Updated 2 years ago
Alternatives and similar repositories for CROssBAR
Users that are interested in CROssBAR are comparing it to the libraries listed below
Sorting:
- A Python package for drug discovery by analyzing causal paths on multiscale networks☆28Updated last year
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.☆65Updated last month
- code for Gogleva et al manuscript☆46Updated 3 years ago
- Source code and data repository for "Ensembles of knowledge graph embedding models improve predictions for drug discovery"☆20Updated last year
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆54Updated 4 months ago
- Method for drug repurposing from knowledge graphs and literature☆36Updated 5 years ago
- TargetDB is a tool to quickly querry multiple publicly available databases and provide an integrated view of the information available ab…☆32Updated last year
- StarGazer is a tool designed for rapidly assessing drug repositioning opportunities. It combines multi-source, multi-omics data with a no…☆35Updated 2 years ago
- [IJMS 2022] DRPreter: Interpretable Anticancer Drug Response Prediction Using Knowledge-Guided Graph Neural Networks and Transformer☆12Updated 3 years ago
- Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery☆28Updated 4 years ago
- Drug Repurposing using TigerGraph and Graph Machine Learning.☆18Updated 3 years ago
- Readings for "A Unified View of Relational Deep Learning for Drug Pair Scoring." (IJCAI 2022)☆97Updated 3 years ago
- Data-driven chemical-induced toxicity prediction by machine learning using chemical and bioactivity data☆10Updated 8 years ago
- A deep learning framework for high-throughput mechanism-driven phenotype screening☆51Updated 4 years ago
- Don't worry about DrugBank licensing - write code that knows how to download it automatically☆61Updated 10 months ago
- The Clinical Trials Knowledge Graph☆64Updated 2 years ago
- Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your co…☆74Updated 2 years ago
- ☆58Updated 5 years ago
- Library of Integrated Cellular Signatures L1000☆31Updated 3 years ago
- DeepGO with Fuzzy DL☆31Updated 3 years ago
- ☆18Updated last year
- This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…☆27Updated 4 years ago
- ☆71Updated 2 years ago
- Introduction to Applied Mathematics and Informatics in Drug Discovery (AMIDD)☆32Updated this week
- a package for streamlined multidomain data integration and translation based on cross-modal autoencoders architectures☆29Updated 2 years ago
- SkipGNN: Predicting Molecular Interactions with Skip-Graph Networks (Scientific Reports)☆64Updated 5 years ago
- A collection of research papers, datasets and software related to knowledge graphs for drug discovery. Accompanies the paper "A review of…☆239Updated 6 months ago
- Code to accompany the "Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs" (Briefings in B…☆19Updated last week
- HoTS: Sequence-based prediction of binding regions and drug-target interactions.☆28Updated 3 years ago
- A high-quality hand-curated logD7.4 dataset of 1,130 compounds☆22Updated 8 years ago