MannLabs / CKGLinks
Clinical Knowledge Graph (CKG) is a platform with twofold objective: 1) build a graph database with experimental data and data imported from diverse biomedical databases 2) automate knowledge discovery making use of all the information contained in the graph
☆520Updated 3 weeks ago
Alternatives and similar repositories for CKG
Users that are interested in CKG are comparing it to the libraries listed below
Sorting:
- Precision Medicine Knowledge Graph (PrimeKG)☆632Updated last year
- Hetionet: an integrative network of disease☆304Updated 2 years ago
- BERN2: an advanced neural biomedical namedentity recognition and normalization tool☆196Updated last year
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆194Updated last year
- A curated list of biomedical knowledge graphs and of resources for their construction.☆63Updated 11 months ago
- A knowledge graph and a set of tools for drug repurposing☆652Updated 3 years ago
- Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)☆48Updated 3 weeks ago
- A unifying framework for biomedical research knowledge graphs☆268Updated 2 weeks ago
- A collection of research papers, datasets and software related to knowledge graphs for drug discovery. Accompanies the paper "A review of…☆236Updated 4 months ago
- Biomedical Named Entity Recognition and Normalization of Diseases, Chemicals and Genenetic entity classes through the use of state-of-the…☆121Updated 3 years ago
- ClinVec: Unified Embeddings of Clinical Codes Enable Knowledge-Grounded AI in Medicine☆71Updated last month
- Repository for the Human Disease Ontology.☆373Updated last week
- A Knowledge Graph for Relational Learning On Biological Data☆105Updated last year
- TypeDB Bio: Biomedical Knowledge Graph☆85Updated 4 months ago
- ☆131Updated 2 years ago
- AIONER☆61Updated last year
- A full-text article retrieval pipeline for biomedical literature.☆21Updated last month
- Build PharMeBINet from different sources.☆19Updated this week
- ☆26Updated 2 years ago
- OpenBioLink is a resource and evaluation framework for evaluating link prediction models on heterogeneous biomedical graph data.☆154Updated last year
- SHEPHERD: Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases☆73Updated 3 months ago
- Code for MedCPT, a model for zero-shot biomedical information retrieval.☆208Updated last year
- Example code and data samples for "An experimentally validated approach to automated biological evidence generation in drug discovery usi…☆12Updated last year
- Medical Concept Annotation Tool☆511Updated 2 months ago
- Fast, world class biomedical NER☆87Updated 7 months ago
- ☆70Updated 3 years ago
- PyTorch Implementation of BioBERT☆341Updated 2 years ago
- The Clinical Trials Knowledge Graph☆61Updated 2 years ago
- PubMedQA: A Dataset for Biomedical Research Question Answering☆371Updated 2 years ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆40Updated last year