A knowledge graph and a set of tools for drug repurposing
☆671Apr 19, 2022Updated 3 years ago
Alternatives and similar repositories for DRKG
Users that are interested in DRKG are comparing it to the libraries listed below
Sorting:
- Hetionet: an integrative network of disease☆343Apr 3, 2023Updated 2 years ago
- ☆58Nov 15, 2020Updated 5 years ago
- High performance, easy-to-use, and scalable package for learning large-scale knowledge graph embeddings.☆1,327Aug 8, 2025Updated 6 months ago
- Precision Medicine Knowledge Graph (PrimeKG)☆707May 27, 2024Updated last year
- A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)☆1,133Jun 10, 2024Updated last year
- Python package for graph neural networks in chemistry and biology☆793Nov 1, 2023Updated 2 years ago
- OpenBioLink is a resource and evaluation framework for evaluating link prediction models on heterogeneous biomedical graph data.☆158May 3, 2024Updated last year
- A Knowledge Graph for Relational Learning On Biological Data☆109Mar 21, 2024Updated last year
- Clinical Knowledge Graph (CKG) is a platform with twofold objective: 1) build a graph database with experimental data and data imported f…☆585Sep 11, 2025Updated 5 months ago
- Source Code for IJCAI'20 "KGNN: Knowledge Graph Neural Network for Drug-Drug Interaction Prediction"☆93Feb 11, 2021Updated 5 years ago
- A collection of research papers, datasets and software related to knowledge graphs for drug discovery. Accompanies the paper "A review of…☆248May 26, 2025Updated 9 months ago
- Therapeutics Commons (TDC): Multimodal Foundation for Therapeutic Science☆1,209Jul 13, 2025Updated 7 months ago
- The Clinical Trials Knowledge Graph☆67Mar 9, 2023Updated 2 years ago
- Graph neural networks for molecular design.☆380Mar 11, 2023Updated 2 years ago
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.☆69Nov 7, 2025Updated 3 months ago
- Bi-Level Graph Neural Networks for Drug-Drug Interaction Prediction. ICML 2020 Graph Representation Learning and Beyond (GRL+) Workshop☆30Oct 6, 2020Updated 5 years ago
- A powerful and flexible machine learning platform for drug discovery☆1,567Aug 12, 2024Updated last year
- Hetnets in Python (relocated from dhimmel/hetio)☆103Sep 4, 2025Updated 6 months ago
- [Bioinformatics 2021] This is the repo for the paper `SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summa…☆90Jul 25, 2024Updated last year
- Descriptor computation(chemistry) and (optional) storage for machine learning☆275Oct 26, 2024Updated last year
- ☆17Aug 31, 2022Updated 3 years ago
- ☆57Jul 29, 2019Updated 6 years ago
- Drug Repurposing using TigerGraph and Graph Machine Learning.☆18Feb 13, 2022Updated 4 years ago
- MolTrans: Molecular Interaction Transformer for Drug Target Interaction Prediction (Bioinformatics)☆225Jul 15, 2022Updated 3 years ago
- GraphDTA: Predicting drug-target binding affinity with graph neural networks☆293Apr 13, 2021Updated 4 years ago
- 🤖 A Python library for learning and evaluating knowledge graph embeddings☆1,951Dec 17, 2025Updated 2 months ago
- Message Passing Neural Networks for Molecule Property Prediction☆2,275Feb 24, 2026Updated last week
- ☆10Apr 19, 2020Updated 5 years ago
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆200May 3, 2024Updated last year
- Deep Generative Models for Drug Combination (Graph Set) Generation given Hierarchical Disease Network Embedding☆31Mar 25, 2023Updated 2 years ago
- Inductive relation prediction by subgraph reasoning, ICML'20☆270Jul 25, 2024Updated last year
- A Network Integration Approach for Drug-Target Interaction Prediction☆185Oct 30, 2022Updated 3 years ago
- Hierarchical Generation of Molecular Graphs using Structural Motifs☆424Jun 28, 2022Updated 3 years ago
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆61Feb 16, 2026Updated 2 weeks ago
- Build PharMeBINet from different sources.☆20Jan 15, 2026Updated last month
- Strategies for Pre-training Graph Neural Networks☆1,052Jul 29, 2023Updated 2 years ago
- Code for paper "A deep learning framework for drug repurposing via emulating clinical trials on real world patient data" (Accepted to Nat…☆100Jan 27, 2022Updated 4 years ago
- Molecular Sets (MOSES): A Benchmarking Platform for Molecular Generation Models☆956Jul 8, 2024Updated last year
- TxGNN: Zero-shot prediction of therapeutic use with geometric deep learning and clinician centered design☆259May 6, 2024Updated last year