๐ช What's the latest version for each database?
โ30Jul 24, 2026Updated this week
Alternatives and similar repositories for bioversions
Users that are interested in bioversions are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Ten quick tips to finish that manuscript that's 90% complete.โ13Mar 30, 2022Updated 4 years ago
- Scripts, data files and ontologies for the FLOPO projectโ11Jul 15, 2026Updated last week
- ๐บ๏ธ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primaโฆโ63Jul 16, 2026Updated last week
- ๐ Easily pick a place to store data for your Python code.โ43Jul 4, 2026Updated 3 weeks ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automaticallyโ43Jun 19, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer โข AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Project code for BioHackathon Europe 2023.โ20Aug 20, 2024Updated last year
- Grounding of biomedical named entities with contextual disambiguationโ54Jun 29, 2026Updated 3 weeks ago
- ๐ฎ An integrative registry of biological databases, ontologies, and nomenclatures.โ145Jul 19, 2026Updated last week
- OBO-formatted ontologies โ networkx (Python 3)โ154Jun 3, 2026Updated last month
- A Python package for benchmarking pathway database with functional enrichment and classification methodsโ13Mar 2, 2021Updated 5 years ago
- Simple analyses and tutorials on the COVID-19 Knowledge Graphโ14Apr 27, 2020Updated 6 years ago
- ๐ A Python package for using ontologies, terminologies, and biomedical nomenclaturesโ75Jul 7, 2026Updated 2 weeks ago
- โ15May 21, 2026Updated 2 months ago
- Collection of tutorials to build RNA-KG v2.0 from scratch and for reproducing experiments such as "context-aware" KG pruning, clustering,โฆโ29Mar 16, 2026Updated 4 months ago
- AI Agents on DigitalOcean Gradient AI Platform โข AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Draft cell type definitions from data - candidates for inclusion in CLโ12Jul 8, 2025Updated last year
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.โ76Jun 3, 2026Updated last month
- Whelk is an OWL EL reasonerโ18Jun 29, 2026Updated 3 weeks ago
- Play Wordle in the CLI. Write an algorithm to play Wordle for you. Ruin all of the fun you've been having.โ12Jun 26, 2024Updated 2 years ago
- โ18Jan 11, 2024Updated 2 years ago
- NetworkX-based Python library for representing ontologiesโ95Jul 12, 2023Updated 3 years ago
- Open Source Antibiotics Series 2โ10Jan 23, 2023Updated 3 years ago
- ๐ Results for the Ranking Metrics submission @ GLB 2022โ10Apr 6, 2022Updated 4 years ago
- ๐ช A cookiecutter package for an enlightened python packageโ41Jun 26, 2026Updated 3 weeks ago
- End-to-end encrypted cloud storage - Proton Drive โข AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- MOVED TO CODEBERGโ19Sep 11, 2025Updated 10 months ago
- KGX is a Python library for exchanging Knowledge Graphsโ183Updated this week
- R code to the 2022 edition of the 30 Day Chart Challengeโ10Aug 25, 2022Updated 3 years ago
- Open Targets Library ETL Pipeline | Apache Beamโ16May 5, 2021Updated 5 years ago
- Source code and data files for "PEMT: A patent enrichment tool with applicability in drug discovery"โ17Jan 27, 2025Updated last year
- ๐ก Unified access to OLS instances like from the EBI and TIBโ14Apr 20, 2026Updated 3 months ago
- A Python package for drug discovery by analyzing causal paths on multiscale networksโ28Jul 1, 2024Updated 2 years ago
- A vocabulary about the processes, entities, and agents involved in the curation of semantic mappingsโ15Jun 10, 2026Updated last month
- visualization tools for Wikidata SPARQL queriesโ30Dec 7, 2022Updated 3 years ago
- Simple, predictable pricing with DigitalOcean hosting โข AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Provided files are a partial extraction of the Orphanet knowledge base on Rare Diseasesโ59Jun 29, 2026Updated 3 weeks ago
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)โ29Feb 9, 2025Updated last year
- Protein Graph in Python for MetaPath-ML and more.โ20Jun 20, 2025Updated last year
- Namespace encoding hierarchical relationships between proteins, protein families, and protein complexes.โ12Mar 9, 2021Updated 5 years ago
- A dumping ground for halfbaked ideas, some of which will hopefully be worked on soonโ28Updated this week
- Communitiy-based Cell Line Ontologyโ18Jun 20, 2026Updated last month
- โ12Feb 12, 2024Updated 2 years ago