🪝 What's the latest version for each database?
☆31Nov 1, 2026Updated this week
Alternatives and similar repositories for bioversions
Users that are interested in bioversions are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Ten quick tips to finish that manuscript that's 90% complete.☆13Mar 30, 2022Updated 4 years ago
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆66Oct 19, 2026Updated 2 weeks ago
- 📮 An integrative registry of biological databases, ontologies, and nomenclatures.☆153Updated this week
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.☆80Jun 3, 2026Updated 5 months ago
- Python library (C++ backend) for degree-preserving network randomization☆14Oct 14, 2019Updated 7 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- A web application for exploring, analyzing, and curating pathway databases☆13Aug 12, 2023Updated 3 years ago
- Scripts, data files and ontologies for the FLOPO project☆12Oct 25, 2026Updated last week
- 📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures☆77Updated this week
- Extract the Ensembl genes catalog to simple tables☆18Updated this week
- This is the repo for CROssBARv2 Knowledge Graph data. CROssBARv2 is a heterogeneous general-purpose biomedical KG-based system.☆16Aug 26, 2026Updated 2 months ago
- 🏷️ Unified access to biomedical ontologies☆12Aug 13, 2026Updated 2 months ago
- Example notebooks that illustrate how to generate knowledge-based features. Features can be used in a variety of ML models, including rec…☆12Feb 23, 2022Updated 4 years ago
- Collection of tutorials to build RNA-KG v2.0 from scratch and for reproducing experiments such as "context-aware" KG pruning, clustering,…☆29Aug 7, 2026Updated 2 months ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆43Jun 19, 2026Updated 4 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- OBO-formatted ontologies → networkx (Python 3)☆157Oct 16, 2026Updated 2 weeks ago
- Grounding of biomedical named entities with contextual disambiguation☆56Jun 29, 2026Updated 4 months ago
- Project code for BioHackathon Europe 2023.☆19Aug 20, 2024Updated 2 years ago
- NetworkX-based Python library for representing ontologies☆96Jul 12, 2023Updated 3 years ago
- A stitching platform for InXight☆15Jun 12, 2026Updated 4 months ago
- A Python package for benchmarking pathway database with functional enrichment and classification methods☆13Mar 2, 2021Updated 5 years ago
- A Python package for drug discovery by analyzing causal paths on multiscale networks☆28Jul 1, 2024Updated 2 years ago
- KGX is a Python library for exchanging Knowledge Graphs☆189Oct 27, 2026Updated last week
- Source code and data files for "PEMT: A patent enrichment tool with applicability in drug discovery"☆17Sep 28, 2026Updated last month
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A prototype for organizing bibliography notes using Wikidata☆14Nov 8, 2023Updated 2 years ago
- NXOntology data: making ontologies accessible as simple JSON files☆14Jun 1, 2025Updated last year
- 🗳️ Prediction and curation of semantic mappings in SSSOM☆12Aug 26, 2026Updated 2 months ago
- Open Targets evidence normalization and scoring pipeline☆12Dec 8, 2022Updated 3 years ago
- A project to capture biological pathway data from academic papers☆29Mar 24, 2025Updated last year
- Build PharMeBINet from different sources.☆24Updated this week
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Mar 26, 2026Updated 7 months ago
- 🛣️ Semantic Mapping Reasoning Assembler (SeMRA): tooling for semantic mappings☆18Sep 25, 2026Updated last month
- Bio relation extraction labeled dataset☆46Apr 15, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A tool for automated uploading and version management of scientific data to Zenodo☆48Apr 13, 2026Updated 6 months ago
- Hetnets in Python (relocated from dhimmel/hetio)☆103Sep 4, 2025Updated last year
- Source code and data files for manuscript titled "Pharmaceutical patent landscaping: A novel approach to understand patents from the drug…☆15Nov 27, 2023Updated 2 years ago
- ☆61Nov 15, 2020Updated 5 years ago
- An LLM-based tool for literature synthesis☆15Jun 20, 2024Updated 2 years ago
- Home of the Genomic Feature and Variation Ontology (GFVO)☆16Mar 13, 2021Updated 5 years ago
- Draft cell type definitions from data - candidates for inclusion in CL☆12Jul 8, 2025Updated last year