๐ช What's the latest version for each database?
โ30Jul 3, 2026Updated this week
Alternatives and similar repositories for bioversions
Users that are interested in bioversions are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Scripts, data files and ontologies for the FLOPO projectโ11Updated this week
- ๐บ๏ธ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primaโฆโ63Jun 13, 2026Updated 3 weeks ago
- ๐ Easily pick a place to store data for your Python code.โ42Jun 19, 2026Updated 2 weeks ago
- Project code for BioHackathon Europe 2023.โ20Aug 20, 2024Updated last year
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automaticallyโ43Jun 19, 2026Updated 2 weeks ago
- Managed Kubernetes at scale on DigitalOcean โข AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A stitching platform for InXightโ15Jun 12, 2026Updated 3 weeks ago
- Grounding of biomedical named entities with contextual disambiguationโ53Jun 11, 2026Updated 3 weeks ago
- ๐ฎ An integrative registry of biological databases, ontologies, and nomenclatures.โ145Updated this week
- OBO-formatted ontologies โ networkx (Python 3)โ153Jun 3, 2026Updated last month
- A Python package for benchmarking pathway database with functional enrichment and classification methodsโ13Mar 2, 2021Updated 5 years ago
- Simple analyses and tutorials on the COVID-19 Knowledge Graphโ14Apr 27, 2020Updated 6 years ago
- KGX is a Python library for exchanging Knowledge Graphsโ179Jun 17, 2026Updated 2 weeks ago
- ๐ A Python package for using ontologies, terminologies, and biomedical nomenclaturesโ76Jun 19, 2026Updated 2 weeks ago
- Collection of tutorials to build RNA-KG v2.0 from scratch and for reproducing experiments such as "context-aware" KG pruning, clustering,โฆโ29Mar 16, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer โข AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Draft cell type definitions from data - candidates for inclusion in CLโ12Jul 8, 2025Updated 11 months ago
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.โ75Jun 3, 2026Updated last month
- Whelk is an OWL EL reasonerโ16Jun 24, 2026Updated last week
- Play Wordle in the CLI. Write an algorithm to play Wordle for you. Ruin all of the fun you've been having.โ12Jun 26, 2024Updated 2 years ago
- import information (affiliation, education) from ORCID database to Wikidata regarding authors of scientific papersโ16May 25, 2023Updated 3 years ago
- Open Source Antibiotics Series 2โ10Jan 23, 2023Updated 3 years ago
- ๐ช A cookiecutter package for an enlightened python packageโ41Jun 26, 2026Updated last week
- ๐ Results for the Ranking Metrics submission @ GLB 2022โ10Apr 6, 2022Updated 4 years ago
- Open Targets Library ETL Pipeline | Apache Beamโ16May 5, 2021Updated 5 years ago
- Open source password manager - Proton Pass โข AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- For BioHackathon Europe 2021.โ30Nov 18, 2022Updated 3 years ago
- Source code and data files for "PEMT: A patent enrichment tool with applicability in drug discovery"โ17Jan 27, 2025Updated last year
- Hosted version of cellxgeneโ20Updated this week
- ๐ก Unified access to OLS instances like from the EBI and TIBโ14Apr 20, 2026Updated 2 months ago
- visualization tools for Wikidata SPARQL queriesโ30Dec 7, 2022Updated 3 years ago
- A Python package for drug discovery by analyzing causal paths on multiscale networksโ28Jul 1, 2024Updated 2 years ago
- Provided files are a partial extraction of the Orphanet knowledge base on Rare Diseasesโ57Dec 10, 2025Updated 6 months ago
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)โ29Feb 9, 2025Updated last year
- Protein Graph in Python for MetaPath-ML and more.โ20Jun 20, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient โข AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A dumping ground for halfbaked ideas, some of which will hopefully be worked on soonโ28Jun 29, 2026Updated last week
- Namespace encoding hierarchical relationships between proteins, protein families, and protein complexes.โ12Mar 9, 2021Updated 5 years ago
- Wikidata service to help create or link author items to published articlesโ36Jun 21, 2025Updated last year
- Schema and generated objects for biolink data model and upper ontologyโ250Jun 27, 2026Updated last week
- API for linked biological knowledgeโ66Apr 26, 2022Updated 4 years ago
- โ12Feb 12, 2024Updated 2 years ago
- An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)โ49May 4, 2026Updated 2 months ago