Hetionet: an integrative network of disease
☆345Apr 3, 2023Updated 2 years ago
Alternatives and similar repositories for hetionet
Users that are interested in hetionet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Hetnets in Python (relocated from dhimmel/hetio)☆103Sep 4, 2025Updated 6 months ago
- Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing☆33Sep 22, 2017Updated 8 years ago
- A knowledge graph and a set of tools for drug repurposing☆674Apr 19, 2022Updated 3 years ago
- ☆58Nov 15, 2020Updated 5 years ago
- OpenBioLink is a resource and evaluation framework for evaluating link prediction models on heterogeneous biomedical graph data.☆158May 3, 2024Updated last year
- A Knowledge Graph for Relational Learning On Biological Data☆110Mar 21, 2024Updated 2 years ago
- Precision Medicine Knowledge Graph (PrimeKG)☆714May 27, 2024Updated last year
- Clinical Knowledge Graph (CKG) is a platform with twofold objective: 1) build a graph database with experimental data and data imported f…☆587Sep 11, 2025Updated 6 months ago
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.☆71Nov 7, 2025Updated 4 months ago
- Schema and generated objects for biolink data model and upper ontology☆224Updated this week
- Processing high-throughput drug indication resources.☆19Mar 15, 2016Updated 10 years ago
- Python package for matrix storage and operations on hetnets☆14Mar 30, 2023Updated 2 years ago
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆200May 3, 2024Updated last year
- OBO-formatted ontologies → networkx (Python 3)☆151Mar 26, 2025Updated 11 months ago
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Jul 10, 2024Updated last year
- 📐 Results for the Ranking Metrics submission @ GLB 2022☆10Apr 6, 2022Updated 3 years ago
- Transforming SemRep Predications into an Open Biomedical Linked Data Resource☆11Jan 26, 2018Updated 8 years ago
- TypeDB Bio: Biomedical Knowledge Graph☆88Jun 2, 2025Updated 9 months ago
- Method for drug repurposing from knowledge graphs and literature☆36Aug 28, 2020Updated 5 years ago
- Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence…☆34Jan 8, 2026Updated 2 months ago
- Repository for the Human Disease Ontology.☆391Updated this week
- A collection of research papers, datasets and software related to knowledge graphs for drug discovery. Accompanies the paper "A review of…☆249May 26, 2025Updated 9 months ago
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆61Mar 9, 2026Updated 2 weeks ago
- Cataloging pharmacotherapies in clinical trial from ClinicalTrials.gov☆26Jun 17, 2016Updated 9 years ago
- Mondo Disease Ontology☆294Updated this week
- 📮 An integrative registry of biological databases, ontologies, and nomenclatures.☆142Updated this week
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub☆32Mar 19, 2024Updated 2 years ago
- Build PharMeBINet from different sources.☆20Jan 15, 2026Updated 2 months ago
- A unifying framework for biomedical research knowledge graphs☆292Updated this week
- 🤖 A Python library for learning and evaluating knowledge graph embeddings☆1,958Dec 17, 2025Updated 3 months ago
- python library for working with ontologies and ontology associations☆133Feb 11, 2025Updated last year
- Source code and data files for "PEMT: A patent enrichment tool with applicability in drug discovery"☆16Jan 27, 2025Updated last year
- A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)☆21Nov 3, 2021Updated 4 years ago
- KGX is a Python library for exchanging Knowledge Graphs☆139Feb 5, 2026Updated last month
- BioGrakn Knowledge Graph☆185Jan 15, 2021Updated 5 years ago
- In Silico Prediction of Novel Therapeutic Targets Using Gene – Disease Association Data☆18Jan 19, 2018Updated 8 years ago
- 📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures☆75Mar 15, 2026Updated last week
- Ten quick tips to finish that manuscript that's 90% complete.☆13Mar 30, 2022Updated 3 years ago
- 🌶️ An ecosystem in Python for working with the Biological Expression Language (BEL)☆136Jun 26, 2024Updated last year