Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence in the Life Sciences, 2022)
☆34Jan 8, 2026Updated 6 months ago
Alternatives and similar repositories for kgem-in-drug-discovery
Users that are interested in kgem-in-drug-discovery are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code to accompany the "Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs" (Briefings in B…☆19Feb 11, 2026Updated 5 months ago
- A collection of research papers, datasets and software related to knowledge graphs for drug discovery. Accompanies the paper "A review of…☆264May 6, 2026Updated 2 months ago
- ☆29Sep 1, 2023Updated 2 years ago
- Source code and data repository for "Ensembles of knowledge graph embedding models improve predictions for drug discovery"☆20Jan 17, 2024Updated 2 years ago
- A Knowledge Graph for Relational Learning On Biological Data☆110Mar 21, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆19Sep 14, 2024Updated last year
- ☆17Apr 15, 2023Updated 3 years ago
- Drug repurposing for COVID-19 using literature-based discovery☆32Sep 6, 2022Updated 3 years ago
- Method for drug repurposing from knowledge graphs and literature☆36Aug 28, 2020Updated 5 years ago
- 基于知识图谱和推荐系统的药物靶标相互作用预测框架☆20Nov 26, 2022Updated 3 years ago
- The code for SAG-DTA: Prediction of Drug–Target Affinity Using Self-Attention Graph Network.☆11Dec 27, 2021Updated 4 years ago
- ☆59Nov 15, 2020Updated 5 years ago
- ☆23Sep 5, 2022Updated 3 years ago
- 📊 Results from the reproducibility and benchmarking studies presented in "Bringing Light Into the Dark: A Large-scale Evaluation of Know…☆36Apr 19, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- learning biology syllabus, geared for machine learning folks☆148Dec 5, 2022Updated 3 years ago
- Multi-Hop Logical Reasoning in Knowledge Graphs☆20Mar 2, 2021Updated 5 years ago
- Network-based project to explore gene connectivity through biological scales☆24Oct 21, 2024Updated last year
- Python script for processing DrugBank XML to MySQL-ready CSV files☆19Mar 6, 2017Updated 9 years ago
- StarGazer is a tool designed for rapidly assessing drug repositioning opportunities. It combines multi-source, multi-omics data with a no…☆40Aug 14, 2023Updated 2 years ago
- Rotate3D: Representing Relations as Rotations in Three-Dimensional Space for Knowledge Graph Embedding☆11Nov 22, 2020Updated 5 years ago
- ☆57Jul 29, 2019Updated 6 years ago
- A Standard Database for Drug Repositioning☆19Jul 28, 2017Updated 8 years ago
- Code repo for COLING 2022 paper "Joint Language Semantic and Structure Embedding for Knowledge Graph Completion"☆53Oct 27, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- The code of paper Duality-Induced Regularizer for Tensor Factorization Based Knowledge Graph Completion. Zhanqiu Zhang, Jianyu Cai, Jie W…☆51Dec 22, 2021Updated 4 years ago
- Design and implementation of FAIR Data Cube☆11Jun 2, 2025Updated last year
- This repository lists papers, codes, and datasets in Biomedical Text Summarisation based on PLM☆23Oct 4, 2022Updated 3 years ago
- Knowledge-enhanced learned representation enriches protein sequence and SMILES drug databases with a large Knowledge Graph fused from dif…☆64Apr 24, 2026Updated 2 months ago
- Interpretable feature construction from taxonomies for text classification☆18Apr 4, 2022Updated 4 years ago
- Protein Graph in Python for MetaPath-ML and more.☆20Jun 20, 2025Updated last year
- [EMNLP 2022 Findings] SMiLE: Schema-augmented Multi-level Contrastive Learning for Knowledge Graph Link Prediction☆22Oct 12, 2022Updated 3 years ago
- Hardware-agnostic Framework for Large-scale Knowledge Graph Embeddings☆67Updated this week
- A Jupyter Notebook extension for Docker☆15Sep 2, 2019Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- [CIKM 2021] Official code of "DisenKGAT: Knowledge Graph Embedding with Disentangled Graph Attention Network"☆57Jul 18, 2022Updated 3 years ago
- Drug Repurposing using TigerGraph and Graph Machine Learning.☆19Feb 13, 2022Updated 4 years ago
- 🏅 KG Inductive Link Prediction Challenge (ILPC) 2022☆85Mar 12, 2022Updated 4 years ago
- Hetionet: an integrative network of disease☆356Apr 3, 2023Updated 3 years ago
- Fork of https://code.google.com/p/ngs-analysis☆17Sep 14, 2013Updated 12 years ago
- International BioHackathon Directory of Events, Projects and Communities☆12Updated this week
- ☆12Oct 5, 2022Updated 3 years ago