AstraZeneca / kgem-in-drug-discoveryLinks
Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence in the Life Sciences, 2022)
☆34Updated 2 months ago
Alternatives and similar repositories for kgem-in-drug-discovery
Users that are interested in kgem-in-drug-discovery are comparing it to the libraries listed below
Sorting:
- ☆57Updated 4 years ago
- Code to accompany the "Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs" (Briefings in B…☆18Updated 2 months ago
- [Bioinformatics 2021] This is the repo for the paper `SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summa…☆87Updated last year
- Source code and data repository for "Ensembles of knowledge graph embedding models improve predictions for drug discovery"☆20Updated last year
- A Knowledge Graph for Relational Learning On Biological Data☆106Updated last year
- ☆34Updated 4 years ago
- A collection of research papers, datasets and software related to knowledge graphs for drug discovery. Accompanies the paper "A review of…☆236Updated 3 months ago
- ☆17Updated 2 years ago
- OpenBioLink is a resource and evaluation framework for evaluating link prediction models on heterogeneous biomedical graph data.☆154Updated last year
- The Clinical Trials Knowledge Graph☆60Updated 2 years ago
- Source code for TKDE'22 "KG-MTL: Knowledge Graph Enhanced Multi-Task Learning for Molecular Interaction"☆28Updated 3 years ago
- Implementation of Using Drug Descriptions and Molecular Structures for Drug-Drug Interaction Extraction from Literature☆40Updated 4 years ago
- ☆11Updated 5 years ago
- Example code and data samples for "An experimentally validated approach to automated biological evidence generation in drug discovery usi…☆12Updated last year
- Bi-Level Graph Neural Networks for Drug-Drug Interaction Prediction. ICML 2020 Graph Representation Learning and Beyond (GRL+) Workshop☆30Updated 4 years ago
- An end-to-end heterogeneous graph representation learning-based framework for drug-target interaction prediction☆30Updated 3 years ago
- Source Code for IJCAI'20 "KGNN: Knowledge Graph Neural Network for Drug-Drug Interaction Prediction"☆89Updated 4 years ago
- SkipGNN: Predicting Molecular Interactions with Skip-Graph Networks (Scientific Reports)☆64Updated 5 years ago
- Knowledge-enhanced learned representation enriches protein sequence and SMILES drug databases with a large Knowledge Graph fused from dif…☆61Updated this week
- Drug-Drug Interaction Prediction Based on Knowledge Graph Embeddings and Convolutional-LSTM Network☆94Updated 5 years ago
- ☆16Updated 3 years ago
- Supplementary code for the paper: Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19☆28Updated 4 years ago
- ☆57Updated 6 years ago
- This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…☆27Updated 3 years ago
- "MUFFIN: Multi-Scale Feature Fusion for Drug–Drug Interaction Prediction".☆12Updated 3 years ago
- ☆25Updated 3 years ago
- ☆68Updated 2 years ago
- ☆78Updated last year
- Drug repurposing for COVID-19 using literature-based discovery☆28Updated 3 years ago
- ☆14Updated 3 years ago