unmtransinfo / TCRD
Code to build the Target Central Resource Database (TCRD).
☆10Updated 3 years ago
Alternatives and similar repositories for TCRD:
Users that are interested in TCRD are comparing it to the libraries listed below
- Protein Graph in Python for MetaPath-ML and more.☆19Updated 3 years ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 2 years ago
- Code to accompany the "Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs" (Briefings in B…☆17Updated last week
- Method for drug repurposing from knowledge graphs and literature☆34Updated 4 years ago
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.☆61Updated last year
- A Standard Database for Drug Repositioning☆19Updated 7 years ago
- A Python package for drug discovery by analyzing causal paths on multiscale networks☆26Updated 9 months ago
- Network representation learning on drug-target-side effects-indication graphs for side effect prediction☆13Updated 5 years ago
- Python package for access to online biomedical resources, usually via REST APIs.☆17Updated this week
- Cataloging pharmacotherapies in clinical trial from ClinicalTrials.gov☆27Updated 8 years ago
- a module to calculate the MeSH similarity☆26Updated 4 years ago
- 🪝 What's the latest version for each database?☆27Updated this week
- Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence…☆33Updated last week
- Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)☆39Updated last week
- ☆55Updated 4 years ago
- Build PharMeBINet from different sources.☆16Updated last month
- ☆15Updated last year
- Software "Disease_ontologies_for_knowledge_graphs" - a knowledge base solution that uses Grakn core and disease ontologies cross-referenc…☆21Updated 4 years ago
- A Database-based knowledge back-end built on and for INDRA. The INDRA Database is a service that can be set up by any user with their own…☆16Updated this week
- ☆16Updated 10 months ago
- Github repo for the Experimental Factor Ontology (EFO)☆57Updated this week
- ☆22Updated 2 years ago
- TargetDB is a tool to quickly querry multiple publicly available databases and provide an integrated view of the information available ab…☆32Updated 9 months ago
- ☆11Updated 5 years ago
- A Knowledge Graph from public databases and scientific literature to extract associations between chemicals and diseases.☆16Updated 9 months ago
- code for Gogleva et al manuscript☆45Updated 2 years ago
- A stitching platform for InXight☆15Updated last month
- Comprehensive Resource of Biomedical Relations with Deep Learning Applications and Knowledge Graph Representations☆29Updated last year
- ☆66Updated last year
- Project code for BioHackathon Europe 2023.☆18Updated 8 months ago