BaderLab / EPIC
This is the public repository for the EPIC tool.
☆17Updated 2 years ago
Alternatives and similar repositories for EPIC:
Users that are interested in EPIC are comparing it to the libraries listed below
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- ☆38Updated last year
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆61Updated 2 months ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 2 years ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆49Updated 5 years ago
- predicting peptide and TCR interaction☆20Updated 4 years ago
- repository containing analysis scripts and auxiliary files☆34Updated 5 years ago
- Knowledge-primed neural networks☆36Updated 2 years ago
- Code and data used in The Great Repertoire Project☆30Updated 3 years ago
- BraCeR - reconstruction of B cell receptor sequences from single-cell RNAseq data☆42Updated 8 months ago
- Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…☆36Updated this week
- TCRGP, a novel Gaussian process method that can predict if TCRs recognize certain epitopes. This method can utilize different CDR sequenc…☆30Updated 2 years ago
- Visualization and analysis platform for metabolic data and network pattern recognition☆39Updated last month
- 🏺 Exploring novel tumor epitope identification☆34Updated 4 years ago
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆26Updated 6 years ago
- R package for analysing proteomics data☆49Updated 2 years ago
- R package for functionally scoring phosphorylation sites☆19Updated 5 years ago
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆35Updated last week
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networks☆28Updated 3 weeks ago
- A 3-Dimensional View of Human Metabolism and Disease☆27Updated 7 years ago
- ☆29Updated 5 months ago
- mist R package files☆10Updated this week
- ☆47Updated 2 years ago
- Tools for Batch Effects Diagnostics and Correction☆16Updated 2 weeks ago
- Connectivity Map analysis in MATLAB☆45Updated 3 years ago
- DRUGZ software☆23Updated 3 years ago
- Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data☆14Updated 3 years ago
- A collection of useful functions for bioinformatics data analysis☆22Updated 10 months ago
- ☆39Updated 4 years ago
- HLA-II ligand predictor.☆43Updated 2 years ago