This is the public repository for the EPIC tool.
☆19Aug 3, 2022Updated 3 years ago
Alternatives and similar repositories for EPIC
Users that are interested in EPIC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Public repository for building and analyzing protein complex maps☆12Dec 6, 2016Updated 9 years ago
- CliXO algorithm re-implemented☆16Nov 9, 2021Updated 4 years ago
- Framework for systematic discovery of novel complexes and differential analysis of cofractionation MS datasets☆14Nov 21, 2025Updated 6 months ago
- Analysis of co-fractionation MS datasets☆13Dec 7, 2021Updated 4 years ago
- Overlapping clustering algorithm for biological and non-biological networks alike☆14Dec 23, 2017Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- HiDeF (Hierarchical community Decoding Framework)☆15Jan 30, 2024Updated 2 years ago
- mist R package files☆10May 5, 2025Updated last year
- ☆17Dec 3, 2025Updated 6 months ago
- HiView: the universal viewer for hierarchical data☆16Mar 23, 2023Updated 3 years ago
- R package with netDx software and data for examples☆13Feb 22, 2023Updated 3 years ago
- Using Huggingface to generate relation expressions☆15Jan 15, 2021Updated 5 years ago
- R package for WikiPathways API☆20Nov 3, 2025Updated 7 months ago
- Network visualization webapp.☆14Mar 6, 2023Updated 3 years ago
- Reproducible drug repurposing: a Python-based framework for building drug-disease association classifiers☆17May 7, 2018Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Cytoscape App Store web application code☆19Updated this week
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …☆102Jul 14, 2020Updated 5 years ago
- Exercises for training scientists to perform some RNA-seq analyses.☆11Oct 7, 2019Updated 6 years ago
- A project to capture biological pathway data from academic papers☆29Mar 24, 2025Updated last year
- ☆36Nov 29, 2021Updated 4 years ago
- a pipeline for single cell RNA-seq data analysis☆67Dec 11, 2023Updated 2 years ago
- Library for mass spectrometry projects☆27May 24, 2026Updated 2 weeks ago
- Deep learning protein-protein binding sites prediction☆22Feb 2, 2023Updated 3 years ago
- Identifying peptide-receptor interactions using AlphaFold-Multimer☆28Sep 12, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- 2019 Toronto Datathon https://www.tdothealthhack.com☆11Oct 4, 2019Updated 6 years ago
- An open-source Python package for dia-PASEF methods with Automated Isolation Design (py_diAID) from the Mann Labs at the Max Planck Inst…☆30Mar 19, 2026Updated 2 months ago
- Build predicted cell-cell interaction networks from single-cell data.☆10Jan 31, 2023Updated 3 years ago
- Tumor Phylogeny Reconstruction via Integrative use of Single Cell and Bulk Sequencing Data☆11Jul 13, 2020Updated 5 years ago
- Lists and 384-well plate maps of compounds and genetic perturbations designed to assess connectivity in profiling assays☆25Jan 3, 2025Updated last year
- Documents used for workshops on single cell analysis☆27Feb 5, 2017Updated 9 years ago
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Mar 26, 2026Updated 2 months ago
- A set of Shiny apps to provide interactive enrichment analysis and exploration of results.☆32May 15, 2026Updated 3 weeks ago
- Python Implementation of SIMLR for single-cell visualization and analysis☆24Jul 28, 2022Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆11Feb 3, 2025Updated last year
- Scripts to reproduce analyses of tradeSeq paper.☆16Feb 5, 2020Updated 6 years ago
- pyQms, generalized, fast and accurate mass spectrometry data quantification☆28Apr 24, 2026Updated last month
- ☆11Nov 19, 2020Updated 5 years ago
- C++ lossless and lossy mass spectrometry compression☆15Sep 16, 2021Updated 4 years ago
- MR project investigating the mediating role of mammographic density in the childhood body size and breast cancer relationship☆11May 14, 2024Updated 2 years ago
- mesa package for Methylation Enrichment Sequencing Analysis☆16Updated this week