MathCancer / PhysiCell
PhysiCell: Scientist end users should use latest release! Developers please fork the development branch and submit PRs to the dev branch. Thanks!
☆160Updated 3 months ago
Alternatives and similar repositories for PhysiCell
Users that are interested in PhysiCell are comparing it to the libraries listed below
Sorting:
- PhysiCell Studio is a graphical tool to allow easy editing of a (XML) model, create initial positions of cells, run a simulation, and vis…☆25Updated this week
- Interactive, particle-based physics, chemistry and biology modeling and simulation environment☆22Updated this week
- GPU-accelerated multicellular modelling framework☆61Updated 3 weeks ago
- 2022 PhysiCell Hackathon and Workshop☆12Updated 2 years ago
- CompuCell3D public source code repository☆67Updated this week
- Chaste - Cancer Heart And Soft Tissue Environment - main public repository.☆131Updated this week
- Simulation platform of animal embryogenesis☆20Updated 2 years ago
- This is an older version of cytosim, a cytoskeleton simulation engine☆27Updated 3 years ago
- Spheroid models of morphogenesis for the GPU.☆41Updated last year
- 3D computational model for lipid membranes☆23Updated 2 months ago
- PhysiBoSS 2.0: a sustainable integration of stochastic Boolean and agent-based modelling frameworks☆25Updated this week
- Virtual Cell Framework☆82Updated this week
- CPM implementation in pure JavaScript☆33Updated this week
- Individual-based Dynamics of Microbial Communities Simulator☆18Updated 2 years ago
- Python package for processing image-based profiling data☆115Updated this week
- GPU Accelerated 3D Cell Simulator☆9Updated last month
- A self-explanatory, hands-on intro to bioimage analysis in python. Slightly outdated but still much liked by learners.☆97Updated 2 years ago
- COPASI is a software application for simulation and analysis of biochemical networks and their dynamics.☆106Updated this week
- Rule-based modeling framework☆62Updated 2 weeks ago
- CellBox: Interpretable Machine Learning for Perturbation Biology☆53Updated last year
- Loading and handling microscopy data in blender☆114Updated this week
- An epithelium simulation library☆62Updated 3 months ago
- Let's infer the forces that cells generate during time series by looking at the angles they make with each other.☆9Updated last year
- Release of the whole cell E. coli model.☆65Updated 5 months ago
- Run encapsulated docker containers with CellProfiler in the Amazon Web Services infrastructure.☆41Updated 2 weeks ago
- Python Environment for Modeling and Simulating Biological Systems☆116Updated last month
- ☆23Updated 2 years ago
- An R package for the analysis and interpretation of cell migration tracks.☆13Updated 8 months ago
- A Python toolkit for flow cytometry analysis supporting GatingML and FlowJo workspaces☆171Updated last week
- Single-cell fluorescence microscopy data analysis☆26Updated 3 years ago