MathCancer / PhysiCell
PhysiCell: Scientist end users should use latest release! Developers please fork the development branch and submit PRs to the dev branch. Thanks!
☆152Updated last month
Alternatives and similar repositories for PhysiCell:
Users that are interested in PhysiCell are comparing it to the libraries listed below
- PhysiCell Studio is a graphical tool to allow easy editing of a (XML) model, create initial positions of cells, run a simulation, and vis…☆23Updated 2 weeks ago
- Interactive, particle-based physics, chemistry and biology modeling and simulation environment☆22Updated 2 months ago
- Chaste - Cancer Heart And Soft Tissue Environment - main public repository.☆129Updated this week
- GPU-accelerated multicellular modelling framework☆60Updated 11 months ago
- 2022 PhysiCell Hackathon and Workshop☆12Updated 2 years ago
- Simulation platform of animal embryogenesis☆20Updated 2 years ago
- This is an older version of cytosim, a cytoskeleton simulation engine☆27Updated 3 years ago
- CompuCell3D public source code repository☆65Updated this week
- COPASI is a software application for simulation and analysis of biochemical networks and their dynamics.☆105Updated last week
- Python Environment for Modeling and Simulating Biological Systems☆113Updated last month
- Spheroid models of morphogenesis for the GPU.☆41Updated last year
- Virtual Cell Framework☆77Updated this week
- Release of the whole cell E. coli model.☆64Updated 3 months ago
- CPM implementation in pure JavaScript☆32Updated last month
- PhysiBoSS 2.0: a sustainable integration of stochastic Boolean and agent-based modelling frameworks☆23Updated this week
- 3D computational model for lipid membranes☆22Updated last month
- An R package for the analysis and interpretation of cell migration tracks.☆13Updated 7 months ago
- Rule-based modeling framework☆61Updated last week
- Core Interface and Engine for Vivarium 1.0☆29Updated 3 months ago
- libRoadRunner: A high-performance SBML simulator☆46Updated 3 weeks ago
- 3rd Annual Undergraduate Quantitative Biology (UQ-bio) Summer School☆13Updated last year
- CellBox: Interpretable Machine Learning for Perturbation Biology☆53Updated last year
- ☆22Updated 2 years ago
- Python framework for Systems Biology modeling☆179Updated 2 weeks ago
- Models that demonstrate the syntax and functionality of BioNetGen language and simulation tools.☆15Updated last year
- Python package for processing image-based profiling data☆104Updated 2 weeks ago
- Modeling toolkit for biochemical simulation☆74Updated 2 months ago
- Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆29Updated last week
- Individual-based Dynamics of Microbial Communities Simulator☆18Updated 2 years ago
- HAL (Hybrid Automata Library) is the one-stop shop for all of your hybrid modeling needs☆37Updated 7 months ago