Alternatives and similar repositories for yalla

Users that are interested in yalla are comparing it to the libraries listed below

• juliendelile / MECAGEN
  Simulation platform of animal embryogenesis
  ☆20Updated 3 years ago
• DanuserLab / u-shape3D
  Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…
  ☆31Updated last week
• DanuserLab / u-unwrap3D
  Transform 3D cell surfaces into different representations including topographic maps, 3D spheres, and 2D images for doing optimized quant…
  ☆34Updated 5 months ago
• gioda / FeARLesS
  4D reconstruction of developmental trajectories using spherical harmonics
  ☆23Updated 10 months ago
• allen-cell-animated / agave
  High quality visualization for volumetric image data
  ☆55Updated last week
• idse / imsane
  ☆12Updated 4 years ago
• DamCB / tyssue
  An epithelium simulation library
  ☆65Updated 5 months ago
• morphometrics / morphometrics
  ☆22Updated 2 years ago
• Open-Science-Tools / nd2reader
  Pure Python library for reading NIS Elements ND2 images and metadata
  ☆48Updated last year
• aafkegros / MicroscopyNodes
  Loading and handling microscopy data in blender
  ☆148Updated 2 months ago
• BiAPoL / napari-clusters-plotter
  A napari plugin for clustering objects according to their properties.
  ☆89Updated last week
• vianamp / MitoGraph
  Software for Quantifying Mitochondrial Content in Live Cells
  ☆30Updated 7 months ago
• bene51 / 3Dscript
  Create 3D/4D animations using a natural language-based syntax
  ☆61Updated 7 months ago
• spatial-image / spatial-image
  A multi-dimensional spatial image data structure for scientific Python.
  ☆44Updated 5 months ago
• torressancheza / ias
  Interacting Active Surfaces
  ☆10Updated 3 years ago
• CAVEconnectome / PyChunkedGraph
  Data backend for fast proofreading of cell segmentations in connectomics datasets
  ☆27Updated this week
• haesleinhuepf / the-segmentation-game
  Gamified image segmentation quality estimation
  ☆19Updated 9 months ago
• aelefebv / nellie
  Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy
  ☆88Updated 2 weeks ago
• funkelab / daisy
  Block-wise task scheduling for large nD volumes.
  ☆33Updated 10 months ago
• clij / clij2
  GPU-accelerated image processing for everyone
  ☆55Updated last year
• tlambert03 / pycudadecon
  Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy
  ☆71Updated 3 weeks ago
• maweigert / spimagine
  GPU accelerated volume rendering / processing in Python
  ☆120Updated 6 years ago
• piximi / piximi_old
  a free, open-source web app for annotating, training, and evaluating image understanding algorithms
  ☆25Updated 4 years ago
• uhlmanngroup / muMatch
  Pipeline for putting surface meshes into correspondence
  ☆26Updated 3 years ago
• DanuserLab / u-signal3D
  The computational platform u-signal3D defines a shape-invariant representation of the spatial scales of molecular organization at the cel…
  ☆11Updated last week
• AllenCellModeling / aicsimageio
  Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python
  ☆221Updated last month
• fmi-basel / LSTree
  LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.
  ☆20Updated 2 years ago
• napari / cookiecutter-napari-plugin
  Cookiecutter for napari plugins
  ☆71Updated last year
• guiwitz / naparimovie
  Create movies from series of key-frames in napari.
  ☆38Updated 4 years ago
• e11bio / volara
  Block-wise operations for large nD volumes
  ☆43Updated 3 weeks ago