BioDynaMo / biodynamo
BioDynaMo is a high-performance and modular, agent-based simulation platform.
☆111Updated this week
Alternatives and similar repositories for biodynamo
Users that are interested in biodynamo are comparing it to the libraries listed below
Sorting:
- The Arbor multi-compartment neural network simulation library.☆116Updated last week
- libRoadRunner: A high-performance SBML simulator☆48Updated last month
- Code Generation Framework For NEURON MODeling Language☆57Updated 5 months ago
- Simulator optimized for large scale neural network simulations.☆138Updated 2 years ago
- Virtual Cell Framework☆82Updated this week
- COPASI is a software application for simulation and analysis of biochemical networks and their dynamics.☆106Updated this week
- Rule-based modeling framework☆63Updated 3 weeks ago
- PhysiCell: Scientist end users should use latest release! Developers please fork the development branch and submit PRs to the dev branch.…☆160Updated 3 months ago
- ☆18Updated this week
- ☆31Updated 3 years ago
- CompuCell3D public source code repository☆67Updated last week
- The Blue Brain BioExplorer (BBBE) is a tool for data visualization experts and scientists to extract and analyze scientific data from vis…☆65Updated 6 months ago
- C++ simulation, reconstruction and analysis framework for particle physics experiments☆61Updated 3 months ago
- The gro bacterial micro-colony growth specification and simulation software. For more information see the gro website, listed below.☆51Updated 4 years ago
- Public release repository for STochastic Engine for Pathway Simulation (STEPS)☆39Updated this week
- Python Environment for Modeling and Simulating Biological Systems☆116Updated last month
- BlueBrain's recipe writer to parameterize structure and logic of a mouse whole-neocortex connectome☆10Updated 3 years ago
- Chaste - Cancer Heart And Soft Tissue Environment - main public repository.☆132Updated this week
- A platform for sharing and reusing biomodeling studies including models, simulations, and visualizations of their results☆41Updated this week
- Ontology of algorithms for analyzing biological models, their parameters, and their outputs☆10Updated 5 months ago
- Models that demonstrate the syntax and functionality of BioNetGen language and simulation tools.☆15Updated last year
- Code repository for the massively-parallel framework for maximum-likelihood fits, implemented in CUDA/OpenMP☆134Updated last week
- Accelerated demonstrator of electromagnetic Particle Transport☆26Updated last week
- Electrophys Feature Extraction Library☆71Updated 2 months ago
- GPU-accelerated multicellular modelling framework☆61Updated 3 weeks ago
- A domain specific language for neuron and synapse models in spiking neural network simulation☆60Updated last week
- Vasculature blood flow computation and impact of astrocytic endfeet on vessels☆11Updated 2 months ago
- ECP-CANDLE Benchmarks☆59Updated 8 months ago
- MOOSE simulator.☆26Updated 3 years ago
- Interactive, particle-based physics, chemistry and biology modeling and simulation environment☆22Updated last week