SoftSimu / CellSim3DLinks
GPU Accelerated 3D Cell Simulator
☆11Updated 4 months ago
Alternatives and similar repositories for CellSim3D
Users that are interested in CellSim3D are comparing it to the libraries listed below
Sorting:
- PhysiCell: Scientist end users should use latest release! Developers please fork the development branch and submit PRs to the dev branch.…☆195Updated 3 weeks ago
- Source code from Bray et al., (2017) A dataset of images and morphological profiles of 30,000 small-molecule treatments using the Cell Pa…☆44Updated 2 years ago
- DCell browser and gene deletion simulator☆124Updated 3 years ago
- Jupyter notebooks for deep lineage analysis of single-cell heterogeneity and cell cycling duration heritability.☆30Updated 5 years ago
- Methods for Image-Based Cell Profiling☆51Updated last year
- Python package for processing image-based profiling data☆133Updated 3 weeks ago
- a python module to download Broad Bioimage Benchmark Collection images☆24Updated 6 years ago
- Starter repository for submissions to the CausalBench challenge for gene-gene graph inference from genetic perturbation experiments.☆32Updated 2 years ago
- CellBox: Interpretable Machine Learning for Perturbation Biology☆56Updated 2 years ago
- Reimplementation of the UniRep protein featurization model.☆108Updated last year
- Run encapsulated docker containers with CellProfiler in the Amazon Web Services infrastructure.☆44Updated last week
- Community-contributed and experimental CellProfiler modules.☆72Updated 3 weeks ago
- Protein function prediction using a variational autoencoder☆94Updated 7 years ago
- Morphological features from images and masks made easy.☆41Updated last week
- A scientific image processing software suite with a focus on CryoEM and CryoET☆164Updated this week
- This is an older version of cytosim, a cytoskeleton simulation engine☆28Updated 4 years ago
- File format for 96-well plate layouts.☆24Updated 2 years ago
- Interactive, particle-based physics, chemistry and biology modeling and simulation environment