juliendelile / MECAGEN
Simulation platform of animal embryogenesis
☆20Updated 2 years ago
Related projects: ⓘ
- Spheroid models of morphogenesis for the GPU.☆38Updated 10 months ago
- ☆10Updated 3 years ago
- Interactive, particle-based physics, chemistry and biology modeling and simulation environment☆17Updated this week
- CompuCell3D public source code repository☆61Updated this week
- An epithelium simulation library☆58Updated 7 months ago
- Link to Documentation☆20Updated 3 weeks ago
- CPM implementation in pure JavaScript☆29Updated last week
- Rule-based modeling framework☆59Updated 2 months ago
- Software for Quantifying Mitochondrial Content in Live Cells☆24Updated 2 months ago
- Multiscale simulation of multi-cellular system☆11Updated this week
- PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology☆58Updated last month
- A framework to visualize the isoclines of matrix games and quantify uncertainty in structured populations (MATLAB, Java)☆9Updated 3 years ago
- Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆27Updated last week
- Modeling Latent Flow Structure using Hodge Decomposition☆9Updated 4 years ago
- Julia package for the Napari multi-dimensional image viewer☆10Updated 2 years ago
- Whole-cell modeling tutorials☆16Updated 4 years ago
- GPU-accelerated multicellular modelling framework☆56Updated 5 months ago
- A flexible Julia toolkit for high-dimensional cellular profiles☆13Updated last year
- HAL (Hybrid Automata Library) is the one-stop shop for all of your hybrid modeling needs☆37Updated last month
- Fast and scalable cell search tool☆41Updated 5 years ago
- Chaste - Cancer Heart And Soft Tissue Environment - main public repository.☆121Updated this week
- An R package for the analysis and interpretation of cell migration tracks.☆13Updated 3 weeks ago
- Models that demonstrate the syntax and functionality of BioNetGen language and simulation tools.☆14Updated last year
- A Julia package for fitting VAEs to single-cell data using count distributions.☆22Updated 11 months ago
- Huge-scale, high-performance flow cytometry clustering in Julia☆31Updated last year
- PhysiCell: Scientist end users should use latest release! Developers please fork the development branch and submit PRs to the dev branch.…☆135Updated this week
- This is an older version of cytosim, a cytoskeleton simulation engine☆27Updated 2 years ago
- Modeling toolkit for biochemical simulation☆71Updated last week
- Muon for Julia☆26Updated 6 months ago
- Online material for the Perspective: "Julia for Biologists" presented at JuliaCon 2021: https://www.youtube.com/watch?v=gRj7E5kYG1I☆95Updated last year