gletort / PhysiBoSSLinks
Multiscale simulation of multi-cellular system
☆26Updated 4 years ago
Alternatives and similar repositories for PhysiBoSS
Users that are interested in PhysiBoSS are comparing it to the libraries listed below
Sorting:
- PhysiBoSS 2.0: a sustainable integration of stochastic Boolean and agent-based modelling frameworks☆26Updated this week
- Multiscale simulation of multi-cellular system☆11Updated this week
- HAL (Hybrid Automata Library) is the one-stop shop for all of your hybrid modeling needs☆37Updated 9 months ago
- Single cell network synthesis toolkit☆23Updated 4 years ago
- Spatial Transcriptomics Dashboard☆27Updated last year
- PyIOmica (pyiomica) is a Python package for omics analyses.☆15Updated 2 years ago
- MERFISHTools implement a Bayesian framework for accurately predicting gene or transcript expression from MERFISH data. On top, they provi…☆14Updated 5 years ago
- Single-cell exploratory data analysis for RNA-Seq☆40Updated 4 years ago
- ☆13Updated 2 years ago
- generalized principal component analysis (GLM-PCA) implemented in python☆60Updated 4 years ago
- Annotation of genomic regions using transcription factor binding sites and epigenetic data☆40Updated 3 years ago
- Single cell RNA Seq data analysis with quantitative phenotypes☆14Updated 4 years ago
- BioBombe: Sequentially compressed gene expression features enhances biological signatures☆65Updated 11 months ago
- LaTeX template to create a compiled PDF (text+figures) e.g. for bioRxiv.org☆21Updated 9 years ago
- 🧫 Read Flow Cytometry Standard (FCS) files in Julia☆17Updated 2 years ago
- NetworkCommons is a community-driven platform designed to simplify access to tools and resources for inferring context-specific protein i…☆25Updated last month
- A collection of scripts for common data management and processing tasks☆9Updated last year
- A mirror of https://bitbucket.org/weischen/pcawg-delly-workflow☆18Updated 5 years ago
- An object oriented python library for topological data analysis of high-throughput single-cell RNA-seq data☆51Updated 6 years ago
- ☆16Updated 5 months ago
- Software to study why most genes are ignored☆15Updated 6 years ago
- ☆77Updated 3 years ago
- MultiMAP for integration of single cell multi-omics☆56Updated last year
- Methods for Image-Based Cell Profiling☆51Updated last year
- Analyzing RNA-Seq with approximate likelihood☆26Updated 4 years ago
- provides common tools and lookup tables used primarily by the hgvs and uta packages☆22Updated 3 months ago
- VorteX Clustering Environment - Java graphical tool for single-cell analysis, clustering and visualization. Latest release:☆34Updated 2 years ago
- A simple pythonic interface to biomart.☆55Updated 5 years ago
- A Feature Density Estimator for High-Throughput Sequence Tags☆23Updated 4 years ago
- An unsupervised transfer learning approach for rare disease transcriptomics☆45Updated 5 years ago