Alternatives and similar repositories for grammar_samples

Users that are interested in grammar_samples are comparing it to the libraries listed below

• bm2-lab / STAMP
  ☆15Updated 6 months ago
• theislab / CellFlow
  Modeling complex perturbations with CellFlow
  ☆102Updated last week
• welch-lab / PerturbNet
  PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbation
  ☆58Updated 5 months ago
• const-ae / linear_perturbation_prediction-Paper
  ☆64Updated 4 months ago
• siyuh / Squidiff
  ☆86Updated last month
• aaronwtr / PertEval
  Evaluation suite for transcriptomic perturbation effect prediction models. Includes support for single-cell foundation models.
  ☆31Updated 4 months ago
• theislab / prophet
  ☆38Updated last month
• EperLuo / scDiffusion
  A model developed for the generation of scRNA-seq data
  ☆80Updated 9 months ago
• biomed-AI / CellFM
  ☆87Updated 3 months ago
• TuftsBCB / RegDiffusion
  Diffusion model for gene regulatory network inference.
  ☆23Updated 4 months ago
• czi-ai / transcriptformer
  ☆94Updated last month
• theislab / cpa
  The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell leve…
  ☆120Updated last year
• SuperBianC / scMulan
  Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.
  ☆60Updated last year
• altoslabs / perturbench
  ☆66Updated 2 months ago
• zou-group / CellVoyager
  ☆100Updated 2 months ago
• sjgosai / boda2
  Computational Optimization of DNA Activity (CODA)
  ☆65Updated 8 months ago
• theislab / scTab
  ☆61Updated last year
• xCompass-AI / GeneCompass
  GeneCompass
  ☆102Updated last week
• WJPina / HUSI
  A human universal senescence index to evaluate celluar senescence
  ☆32Updated 3 months ago
• czi-ai / scGenePT
  ☆27Updated 10 months ago
• cantinilab / scPRINT
  🏃 The go-to single-cell Foundation Model
  ☆123Updated last week
• sanderlab / scPerturb
  scPerturb: A resource and a python/R tool for single-cell perturbation data
  ☆156Updated 9 months ago
• Perturbation-Response-Prediction / PRnet
  PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturb…
  ☆71Updated last year
• antigenomics / tcren-ms
  📝 [Paper] TCRen: predicting TCR-peptide recognition based on residue-level pairwise statistical potential
  ☆24Updated 2 months ago
• ArcInstitute / cell-eval
  Comprehensive suite for evaluating perturbation prediction models
  ☆112Updated last month
• nitzanlab / biolord
  ☆88Updated last year
• nceglia / genevector
  Vector representations of gene co-expression in single cell RNAseq.
  ☆36Updated last month
• mcgilldinglab / UNAGI
  UNAGI: deep generative AI for virtual disease and unsuperivsed in-silico perturbations.
  ☆45Updated this week
• epigen / CellWhisperer
  CellWhisperer bridges the gap between transcriptomics data and natural language, enabling intuitive interaction with scRNA-seq datasets
  ☆163Updated 2 weeks ago
• carpenter-singh-lab / 2022_Haghighi_NatureMethods
  High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations
  ☆51Updated 4 months ago